Tessaracoccus palaemonis: KDB89_13000
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Entry
KDB89_13000 CDS
T08695
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tej
Tessaracoccus palaemonis
Pathway
tej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDB89_13000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tej03019
]
KDB89_13000
03400 DNA repair and recombination proteins [BR:
tej03400
]
KDB89_13000
Enzymes [BR:
tej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDB89_13000
Messenger RNA biogenesis [BR:
tej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KDB89_13000
DNA repair and recombination proteins [BR:
tej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KDB89_13000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Pribosyltran
RecQ_Zn_bind
HEM4
Motif
Other DBs
NCBI-ProteinID:
QXT62637
LinkDB
All DBs
Position
complement(2849973..2852279)
Genome browser
AA seq
768 aa
AA seq
DB search
MRDDWSDVPPDDDWAPPPEDDFLPPDDLHGAGWEAGLPRRGIEPEPRQSAGPLERTTVAE
WPPAPRDEAETVLRRLVGRDDVALREDQWSAIEALVNDRRRVLVVQRTGWGKSAVYFVAT
ALLRARDAGPTVIISPLLALMRDQIAAAERAGIRAVTMNSANVTEWDEVRERISSGDIDV
LLCSPERLNNPDFRDTVLPRLSADAGLIVVDEAHCVSDWGHDFRPDYRRIRDLIANLPVN
IPVLATTATANERVTRDVAEQLAVHADGRAEDVLVLRGSLDRESLHLAVLPVTDQPTRVA
WLVEALQSFQGSGIVYTLTVAAANQVAEQLRERGIDARAYTGQTDNAEREQLEADLLANR
VKALIATSALGMGFDKPDLGFVIHLGAPSSPIAYYQQVGRAGRGVADATVVLVPGEEDGA
IWSYFGSLAFPAERQVREALSVLGEHGTMSLPKLETYVDLKRSRLEQMLKVLDVDGAVRR
VKGGWTATGQSWTYDAERYERVEQSRLHEQQAMKDYEATAGCRMAFLRAQLDDPELVDGW
RCGRCDRCSDLHLPPLPDRAAIDAARAAMDRPGIEITARRQWPSGMSALGVSLSGRIPVD
EQAEAGRAVARLDGLGWSAPLRDLFAPDAPDSEVPVPLRHALARVLEAWPEASEIDGIVY
LASATRPRLVEHLAQGLGRILDRPIVGEIRPKDGSEPGRHDVGSALRLAGIAGRLELALS
DQARAGLPGRRILLVDDRTDSGWTLTFAARLLRQAGASVVLPFVLAQE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgactggagcgacgttccaccggacgacgactgggcgccgccgccggaggac
gacttcctgccacccgacgacctccacggcgcgggctgggaggccggcctcccgcgccgg
ggcatcgagccggaaccccgtcagtcggcggggccgctggagcgcaccaccgtcgccgag
tggcctcccgcgccacgcgacgaggccgagaccgtgctccgtcgcctcgtcggccgcgac
gacgtggcgctgcgcgaggaccagtggtcggcgatcgaggcgctggtcaacgaccgccgc
cgcgtgctggtcgtgcagcgcaccggctggggcaagtcggccgtctacttcgtcgcgacg
gcgctgctgcgcgcccgcgacgccgggcccacagtcatcatctcgccgctgctcgcgctg
atgcgcgaccagatcgccgcggccgagcgggccggcatccgggccgtgacgatgaactcg
gccaacgtgaccgagtgggacgaggtgcgcgaacgcatctcctcaggcgacatcgacgtg
ctcctctgctcgcccgagcgcctcaacaacccggacttccgcgacaccgtgctgccgcgc
ctgtccgccgacgccgggctcatcgtggtcgacgaggcgcactgcgtctccgactggggc
cacgacttccggcccgactaccggcgcatcagggacctgatcgccaacctgccggtcaac
atcccggtgctggcgaccacggcgaccgccaacgagcgcgtcacgcgcgacgtcgccgag
cagctggccgtgcatgccgacggcagggccgaggacgtgctggtcctgcgtggctcgctg
gaccgcgagtcgctgcacctggccgtgctgccggtgacggaccagccgaccagggtcgcg
tggctcgtggaggcgctgcagagcttccaggggtccggcatcgtgtacacgctcacggtc
gcggccgcgaaccaggtcgcggagcagctccgcgagcggggaatcgacgcccgggcgtac
accggacagaccgacaacgccgagcgcgagcaactcgaggccgacctgctggccaaccga
gtcaaggcgctcatcgcgacaagcgcactcggcatgggcttcgacaagccggacctcggc
ttcgtgatccacctcggcgcgccgagctcgcccatcgcgtactaccagcaggtcggacgt
gcgggtcgcggcgttgccgacgccaccgtcgtgctcgttcccggcgaggaggacggcgcg
atctggagctacttcgggtcgctggcgtttcccgccgagcgccaggttcgcgaggcgctg
tcggtgctgggggaacacggcacgatgtcgctgccgaagctcgagacctacgtcgatctc
aagcgcagccgcctggagcagatgctgaaggtgctggacgtcgacggcgccgtccgccgc
gtcaagggcggctggacggccacggggcagtcgtggacctatgacgccgagcgatacgag
cgcgtcgagcagtcccggctccacgagcagcaggccatgaaggactacgaggccaccgcc
gggtgccgcatggcgttcctgcgcgcccagctcgacgaccccgagctggtcgacggctgg
cgctgcggtcgctgcgaccgctgctccgacctgcacctcccgccgttgcccgaccgcgcg
gccatcgacgccgcccgcgccgcgatggaccgcccaggcatcgagatcacggcgcgtcgg
cagtggccctcgggcatgagcgcgctcggcgtgagcctctccggccgcatccccgtcgac
gagcaggccgaggccggccgcgccgtcgcccggctcgacggcctcggctggtccgcgccg
ctgcgcgacctcttcgcgcccgacgcccccgactccgaggtgcccgtgccgctcaggcac
gcactggcccgcgtcctggaggcgtggccggaggcgtccgagatcgacgggatcgtctac
ctcgcctccgccacccggccccggctcgtcgagcatctggcccaggggttgggaaggatc
ctcgaccggccgatcgtcggcgagatccggcccaaggatggctccgaaccgggccggcac
gacgtcggctcggcgctgcggctggccggcatcgccggcaggctggagctggcgctgtcc
gaccaggcgcgcgccggtctgcccggtcgtcggatcctgctggtcgacgaccgcaccgac
tccggctggacgctcaccttcgccgcccggctgctgcgccaggccggcgcgtcggtcgtg
ctgccgttcgtcctggctcaggagtaa
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integrated database retrieval system
