KEGG   Tepidimonas sp. HKU77: ACPP3B_11855
Entry
ACPP3B_11855      CDS       T11695                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
tek  Tepidimonas sp. HKU77
Pathway
tek03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tek00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACPP3B_11855 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tek03021]
    ACPP3B_11855 (rho)
   03019 Messenger RNA biogenesis [BR:tek03019]
    ACPP3B_11855 (rho)
Transcription machinery [BR:tek03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ACPP3B_11855 (rho)
Messenger RNA biogenesis [BR:tek03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ACPP3B_11855 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_25 S1CSD-TOTE-2 OB_RNB Fungal_virus_P2_C AAA ResIII Spore_III_AA
Other DBs
NCBI-ProteinID: XRL42916
LinkDB
Position
complement(2459606..2460871)
AA seq 421 aa
MHLNELKALHVSELLKMAEALEIENTGRMRKQELMFAIIKKRAKAGEQVFADGVLEVLPD
GFGFLRDPTASYTASTDDIYISPSQIRRFNLHTGDMVEGDVRIPKDGERYFALNKLDKIN
GLPPEQNKHKIMFENLTPLFPKEHMKLEREGIKSEENITGRIIDIIAPIGKGQRALIVAP
PKSGKTVMMQHIAHAITSNYPEVTLMVLLVDERPEEVTEMQRTVRGEVIASTFDEPAARH
VHVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVLPSSGKVLTGGVDANALQRPKR
FFGAARNVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLDRRLYEKRVFPSIQ
LSRSGTRREELLLPPEILQKTRILRQFFYNMDEIEAMEMVLKSMKQTKNNQEFFELMRRG
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcacttgaatgaactgaaggccctgcacgtctcggagctgctcaagatggccgaggcg
ctcgagatcgagaataccggccgcatgcgcaagcaggagctgatgtttgcgatcatcaag
aagcgcgccaaggcaggcgagcaggtgttcgcggacggtgtgctggaggtgctgcccgac
ggcttcggtttcttgcgggatccgacggccagctacaccgccagcaccgacgatatctac
atctcgcccagtcagatccggcgcttcaacctgcacaccggcgacatggtcgagggggac
gtgcgcatccccaaggacggcgagcgctatttcgcgctcaacaagctcgacaagatcaac
ggcttgccgcccgagcagaacaagcacaagatcatgttcgagaacctcacgccgctcttt
cccaaagagcacatgaagctcgagcgtgagggcatcaagagcgaggaaaacatcaccggc
cgcatcatcgacatcatcgccccaatcggcaaaggccagcgcgcgctgatcgtggcgccg
cccaagagcggcaaaaccgtcatgatgcagcacatcgcgcacgccatcaccagcaactat
cccgaggtgacgctgatggtgctgctggtcgacgagcgcccggaggaagtgaccgagatg
cagcgcaccgtgcgcggcgaggtcatcgcctccaccttcgacgagccggccgcacgccac
gtgcacgtggccgagatggtcatcgagcgcgccaagcgcctggtcgagctgaaaaaggac
gtggtcatcctgctcgactccatcacgcggctggcgcgtgcctacaacaacgtgctgccg
tcgtcgggcaaggtactcaccggcggcgtggacgccaacgcgctgcagcgacccaagcga
ttctttggtgccgcacgcaacgtggaagaaggcggcagcctcaccatcatcgccaccgca
ctggtggacaccggcagccgcatggacgaggtgatcttcgaggaattcaaaggcaccggc
aactgcgaaatccacctcgaccggcgcctgtacgaaaagcgcgtcttcccctcgatccag
ctcagccgcagcggcacccgccgcgaggagctgctgctgccgcccgagattctgcaaaag
acccgcatcctgcgccagttcttctacaacatggacgaaatcgaggcgatggagatggtg
ctcaagagcatgaagcagaccaagaataaccaggagttcttcgagctcatgcggcgcggc
ggctga

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