Thermosynechococcus vestitus: tll1566
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Entry
tll1566 CDS
T00090
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tel
Thermosynechococcus vestitus
Pathway
tel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
tll1566 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tel03400
]
tll1566 (fpg)
Enzymes [BR:
tel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
tll1566 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
tll1566 (fpg)
DNA repair and recombination proteins [BR:
tel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
tll1566 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Zn_ribbon_8
Auto_anti-p27
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
BAC09118
UniProt:
P59065
LinkDB
All DBs
Position
complement(1632598..1633452)
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AA seq
284 aa
AA seq
DB search
MPELPEVETVRRGLELVTLKQPIVDVEVLLARSIALPKEPQAFIEHLRDRAIEQWQRRGK
YLLATLDDGSRLVIHLRMSGQLLWLTTPQPPCPHTRVRWFFPTRAELRFVDQRTFGRCWW
LPPDCRVAEAIPALATLAPEPLSEAFTVAFLAARLAHCRRSIKTALLDQSIVAGMGNIYA
DESLFLSGLHPTQSAHTLTPEQVQRLHGVICQVLREGIAAGGTTIRTFMSPAGVNGHYGG
QAWVYGRKGEACRVCGTTIERLRLAGRSSHYCPQCQPLSSAIGK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattaccggaagttgaaacggtacgtcgtgggctagagctcgtcacccttaaa
caacccattgttgacgtcgaagtgcttctagcccgctctattgcgcttcccaaagagccg
caagccttcatcgagcacttgcgcgatcgcgccattgaacagtggcaacgacggggcaag
taccttttggcgaccctagatgacggcagccgcctcgtgattcatctacgcatgagtggc
cagttgttgtggctgaccactcctcagcccccctgtccccatacccgtgtgcgctggttt
ttcccaacaagggcagaactccgctttgttgatcaacgtacctttggccgctgttggtgg
ctgccaccagattgtagagtggcagaggccattcccgccctggccacattggcaccggaa
cccctgagtgaggcctttacagtggcattcttggcggcgcggctggctcactgtcgtcgc
tccattaaaacagcgcttttggatcaaagcattgttgcgggcatgggaaacatctatgcc
gatgaaagccttttcctgagtggcctccaccccacccaatcggcccataccctcacccca
gaacaagttcagcggcttcatggggtcatttgtcaagtgctgcgggagggcattgcagcg
gggggcaccactatccgcacctttatgagcccggcgggggtgaatggtcactatggaggt
caagcatgggtttatggtcgcaaaggggaggcctgccgcgtctgtggcacaaccattgaa
cggctgcgtttggcaggacgctccagtcactattgcccccagtgtcagccactgtcttcg
gcaattggcaaataa
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