Thermosynechococcus vestitus: tll1881
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Entry
tll1881 CDS
T00090
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tel
Thermosynechococcus vestitus
Brite
KEGG Orthology (KO) [BR:
tel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tel03032
]
tll1881 (topA)
03400 DNA repair and recombination proteins [BR:
tel03400
]
tll1881 (topA)
Enzymes [BR:
tel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
tll1881 (topA)
DNA replication proteins [BR:
tel03032
]
Prokaryotic type
DNA Topoisomerases
tll1881 (topA)
DNA repair and recombination proteins [BR:
tel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
tll1881 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BAC09433
UniProt:
Q8DHR4
LinkDB
All DBs
Position
complement(1968275..1970938)
Genome browser
AA seq
887 aa
AA seq
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MSTLVIVESPAKARTIRKFLPPDYRVEASMGHVRDLPRSAADVPPEFRGEEWATLGVNVA
AGFEPLYIVPKEKQKVIKELKAALKTADELLLATDEDREGESISWHLLQLLEPKVPVRRM
VFHEITEEAIQEALHNCRDVNQQLVRAQETRRILDRLVGYTLSPLLWRKIAPHLSAGRVQ
SVAVRLLVQRERERLAFRKGQFWDLKATLDQRGTLFPARLVSVGGQRLATGNDFDPTTGQ
LRNPDAVLLLDEAAANALRDRLLTETWTVTEQEERQQTRKPAPPFTTSTLQQEANRKLHL
SAQETMRIAQKLYEEGYITYMRTDSVHLSDQAIAAARSCVEAMYGKAFLSPQPRQYTTKT
KGAQEAHEAIRPAGSQFRTPQETGLRDRELELYELIWKRTVASQMADARVTLLTVSITAG
DALFRAHGKRIDFPGFFRAYVEGSDDPDAALESQEVMLPVMQVGDILRCQALESVRHETQ
PPPRYTEASLVKALEQAGIGRPSTYATIISTIQDREYAIRRGNALEPTFTAFAVTALLEK
YFPDLVDINFTARMEQTLDDISTGEVQWQPYLESFYLGENGLEQQVKERERTIEATEARA
IALPELNAEVVVGRFGPFVVYQNGNGSEPIKASLPQDATPGSLTREQVEQLIRQKLEGPD
KLGVHPETGEPIFLLTGRFGPYVQLGEATEANPKPKRASLPKGVSPDEVTLDLAITLLSL
PRTLGVHPETGKLIQANQGRFGPYIVHDPEGEKDYRSLKGEDDVYTITLERALELLATPK
SSRARAKKQVLAVVGTHPEDGKLVQIFDGPYGPYVNHGKVNASLPEGVTPETMTLEQALL
LLAEKAPKKTRRSATATAPKPKSTIKRTSKKTATQTANTSRRKSTET
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccttgtcatcgtcgaatccccagcaaaagcccgtaccattcgcaaatttctg
ccgccggactatcgcgttgaagcctcgatggggcatgtccgtgatctgccccgcagtgcc
gctgatgtgccccccgaattcaggggggaagagtgggcaaccctaggggtgaatgtcgct
gctggctttgaacccctctacattgttcctaaagagaagcaaaaagttatcaaagaattg
aaagctgccctcaaaaccgccgatgaactcctgctcgcgaccgatgaagaccgggaaggg
gaaagcattagttggcacttgctgcaactgttggagccaaaggtgccggtgcggcggatg
gtcttccatgaaattactgaggaagccatccaagaggcgctgcacaattgccgcgatgtc
aatcaacaattggtgcgtgctcaagaaacgcggcgtatcctcgatcgcctggtgggctat
accctgtcccccctgctgtggcggaaaattgccccccatctgtcagcggggcgggtgcag
tcggttgcagtgcgcctattggttcaacgggagcgagagcggttggccttccgtaagggg
caattttgggatctcaaggccaccttagatcaaaggggaaccctctttccagcgcgtttg
gtgagtgtgggtggtcagcgcttggccacaggcaatgattttgatcccactacaggacag
ctacgtaatcctgatgctgtcttgctcttggatgaggcagccgccaacgccctgcgcgat
cgcctgctaacggaaacctggacggtcaccgaacaagaggagcgccaacaaacccgcaaa
cccgctcccccctttaccacctcgaccctgcaacaggaggctaaccgcaaactgcacctc
tcggcccaggagacgatgcgcattgcccaaaagctctacgaagagggctacatcacctat
atgcgtacggactcggtccatctgtcggatcaggcgatcgctgccgcccgcagttgtgtg
gaagccatgtatggcaaagcctttttgtcaccccagccgcgtcagtacaccaccaaaacc
aagggggcccaagaagcccacgaagcgattcgccctgcgggtagccagtttcgcaccccc
caagaaaccggccttagggatcgggaactggaactctacgaactgatctggaagcgtacg
gtggcctcccagatggctgatgcccgtgtaactctactaacggtgtcgattacggctggg
gatgccctcttccgtgcccacggtaaacgcattgattttccagggtttttccgtgcctat
gtggaaggttccgatgatcccgatgccgccctcgaaagccaagaggtgatgctgccggtg
atgcaagtgggggatattctccgctgccaagcccttgaaagtgtgcgtcacgaaacccag
ccgccgccgcgctacaccgaagccagccttgttaaagcccttgagcaagccggtattggg
cgccccagcacctatgccacaatcattagcacgatccaagaccgcgagtatgccattcgg
cgaggcaatgcccttgaacctacgtttactgcctttgcggttacggcgctgctagagaaa
tacttccccgacttggtggatattaactttacggcgcggatggagcaaaccctggatgat
atttccacaggggaggtgcagtggcagccttaccttgaatccttctatctgggtgaaaat
ggccttgagcagcaggtcaaagagcgggagcggacaattgaggcaactgaagcacgggcg
atcgctttgccagaactgaacgctgaagtggtggtgggtcgctttggtccctttgtagtc
tatcaaaatggcaatggtagtgagcccattaaggcctccttgccccaggacgccacccca
ggtagtctcacccgtgaacaggtggagcaattaattcgccaaaaactggagggtcctgac
aagctgggggtccatcctgaaacgggagaaccgatttttctgctgacggggcgctttggt
ccctatgtgcagttgggggaagccacagaggccaatccaaaacccaaacgagcgtcccta
cccaagggagtgagtcccgatgaagtcaccctagacttggcgattactctgttatcactg
ccgcggacattgggggtgcatcccgaaactggcaaactgattcaagccaatcaaggtcgc
tttggcccctacattgtccacgatcccgagggtgaaaaagactatcgttccctcaagggg
gaggatgatgtgtatacgattaccctagagcgtgccctagagctgctggcaacaccgaaa
tcgagtcgcgctcgggccaaaaaacaggtgcttgcggtggtagggactcaccccgaggat
ggaaaactggtacagatcttcgacggcccctatggcccctatgtcaaccacggtaaggta
aatgcctccctgccggagggggtgacaccagagacaatgacccttgagcaagccctgctc
ctgttggcggaaaaagcacccaagaaaacccgccgcagcgcaacggccactgccccaaaa
cccaaatcgacaatcaaaagaaccagtaaaaagacggccacccagaccgcaaacactagc
cgccgtaagtcaacggaaacctag
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