Thermosynechococcus vestitus: tlr0174
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Entry
tlr0174 CDS
T00090
Symbol
recJ
Name
(GenBank) single-strand-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tel
Thermosynechococcus vestitus
Pathway
tel03410
Base excision repair
tel03430
Mismatch repair
tel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
tlr0174 (recJ)
03430 Mismatch repair
tlr0174 (recJ)
03440 Homologous recombination
tlr0174 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tel03400
]
tlr0174 (recJ)
DNA repair and recombination proteins [BR:
tel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
tlr0174 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
tlr0174 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
tlr0174 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Toprim
Motif
Other DBs
NCBI-ProteinID:
BAC07727
UniProt:
Q8DME4
LinkDB
All DBs
Position
154052..156295
Genome browser
AA seq
747 aa
AA seq
DB search
MQRPWQIYSADPAPPDFIEAVKQLHPEAGAITAQLLWQRGYRDSLRQVPPFLDWRYYESA
SPLEFPEMSAALGRLQQALDQQEKVVIWGDFDTDGVTATAVLWEGLKPLLGTQLVDFYIP
NRHHDSHGLSPHGLQQLQQKGVALIITCDTGSTNGPEIVLARQLGMDVIVTDHHTLDPTP
LGAVALINPRQLPWDHPLRHLSGVGVAYKFLEAVYDRWPEKTQGYPLENLLDLVAIGLIA
DWVELRGECRYLAQRGLDQLGKRQTLRPGIAALLGHVSKHRAWQREISFTVAPRLNAVSR
VEGDVRPLITLLTTQDRHEARQLAERIATLNTERQRRQKEVTRMAHAKAAQLDLSASRVI
LLTDDNWPLSLLGLVANDIVKTYGRPALLLQTNPETGMAVGSARSDGSVDLYEAFHSQRH
LLEGLGGHPYAVGFRLKMAHIPLLAAALNQFLAQQEGTASATPKPLVIDLEVTLGQLNGQ
LLKELEVLAPFDSTHHPYPRLLVRNVELTQLRDNNSHGGRRYVSMVLHDRQHQHTFPAKW
WDHQIGDCPQGACDLVIELEQWQSSLSAVIKELRPSETNVIQEASFQPLMDYRDRPPAAS
VKGLRVETCPTSRQSWRQWIQRAKREQQPLILAYAPPPEQDALKVWREFLTLCQQATQQG
KPLEREGLQKRLGIEATTLNYALQVLETLGVKVLSTPEEFWCQWPPQLSSSPPTGLALER
FTAAIAEENFRRRYFAAAPLQALQETY
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcccttggcaaatctattctgctgatcccgctcccccagacttcatcgaggca
gttaagcagctccatcccgaggcaggcgccattacggctcagttactttggcagcgcggc
taccgtgattcccttcggcaagtgcccccttttctagattggcgctactacgagtcagcc
tcccccctagagtttccagagatgtccgctgccctagggcgtttgcaacaggcactcgat
caacaggaaaaagttgtgatttggggagactttgacaccgatggagttacagcgactgcc
gtcctttgggaaggactaaaaccccttttgggaacgcaactggtggatttttatattccc
aatcgccaccacgactcccatggtctttcgccccatggcctccagcagcttcagcaaaaa
ggcgtcgctctaattattacctgcgatacgggctctaccaatggccctgaaattgtcctt
gcccgtcagttggggatggatgtgattgttactgatcaccacacccttgatcccactccc
ttgggggccgtggcgctgatcaatccgcggcagttgccctgggatcatcccctacgtcat
ttatcgggagttggcgttgcctacaaattcttggaagccgtctatgacagatggccagag
aaaacccaggggtatcccctcgagaatctccttgatctggtggccattggcctaattgct
gattgggttgaattgcgaggagagtgccgctatcttgcccagcgaggcttagaccaactc
ggaaagcgtcagaccctccgacccggaattgctgcccttttggggcacgtgtccaagcat
agggcttggcagcgggagattagttttaccgtcgccccccgcctcaatgccgtgagtcgt
gtagagggggatgtgcgacccctgattacgctcttgaccacccaagatcggcacgaagcg
cggcagttggcagagcgcatagcaaccctgaatacagaacggcagcgacgccaaaaagag
gtgacgaggatggctcatgccaaggcggctcagttagacctctcagcatcacgggtgatt
ctcctcaccgatgacaattggccattgagtcttttggggctggtggcgaacgatattgtc
aaaacctatggtcgccccgcccttttgctgcagacgaatccagaaacggggatggcagta
ggttcagcgcgctctgatggctctgtggatctctatgaggcattccatagccaacggcat
ttacttgaggggttgggtgggcatccctatgcagtaggctttaggctaaagatggcgcac
atcccccttttggcagcagccctcaaccaattcttggcacagcaagagggcaccgccagc
gctacaccgaaaccgttagtcattgacctggaagtcaccttgggtcaacttaatgggcaa
ttgctcaaagaactagaagtccttgccccctttgatagcacccaccatccctatccgcga
ttgctggtgcgcaatgtggaactcacccaactgagggataataacagtcacggcgggaga
aggtatgtctcaatggtgctccacgatcgccagcaccagcacacctttcctgccaagtgg
tgggatcatcaaatcggcgactgcccccagggagcctgtgatctcgtgattgaactagag
cagtggcaaagctccctatcagccgtcattaaagagctacgacccagtgaaaccaatgtg
atccaagaagcgtcttttcagccccttatggattatcgcgatcgcccccccgcggcaagc
gtcaagggtttgcgcgtagaaacctgccccacctcccggcaaagctggcgccaatggatt
cagcgagcaaagagggaacagcaacccttgattttggcctacgctcctcccccagagcag
gatgccctaaaggtctggcgggaatttctaacgctgtgccaacaagccacgcaacaggga
aaacccttagaacgagaggggctgcagaaacgcctgggcattgaagccacgacactcaac
tatgccctccaggtgcttgagaccctgggggttaaggttctctctaccccagaggaattt
tggtgtcaatggccaccacagctcagctcttctccccctacgggactggccttagagagg
ttcacagcagcgatcgccgaggagaatttccgtcgtcgctattttgctgctgcccccctc
caggcccttcaggaaacctattaa
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