Thermosynechococcus vestitus: tlr1083
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Entry
tlr1083 CDS
T00090
Name
(GenBank) ORF_ID:tlr1083; probable ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tel
Thermosynechococcus vestitus
Brite
KEGG Orthology (KO) [BR:
tel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tel03016
]
tlr1083
Enzymes [BR:
tel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
tlr1083
Transfer RNA biogenesis [BR:
tel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
tlr1083
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAC08636
UniProt:
Q8DJY7
LinkDB
All DBs
Position
1116687..1117322
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AA seq
211 aa
AA seq
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MDLDFPLECFDYDLSPTALAHFLNADQLAVDTETMGLNIPRDRLCLVQVCDPEGQVAVVK
IGRGQKEAPHLQQLLEHPRITKIFHYARFDLATLRYHLGIRVHPVFCTKIASKIARTYSP
RHGLKDLVLDLLGVEIDKSAQSSDWGNATALREDQLRYAANDVRYLIPLRQQLTAMLKRE
ERFELVQTALSCLPAIVDLDLAGYTQVFEHG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggatctagactttccccttgagtgctttgactacgatttgagtcccaccgccttggcg
cactttctcaatgccgatcagttggctgtggatacggaaaccatgggcttgaatatcccc
cgcgatcgcctgtgcttagtgcaggtgtgtgaccccgaggggcaagtggcagtggtcaag
attggccggggacaaaaagaagcaccccatcttcagcaactcctagagcacccccgcatt
accaaaatcttccactatgctcgctttgatctggccacattgcgctaccacttgggtatc
cgtgttcatcctgtcttctgcaccaaaattgccagcaagattgctcgtacctattcaccc
cgccatggccttaaggatttggttttggatttgctgggggtggaaattgataaatcggcc
caaagctctgactggggtaatgccacggcactgcgggaagatcaattgcgttatgccgcc
aatgatgtgcgctatctcattcccctgcggcagcaactaacggcaatgttaaaacgggaa
gaacgctttgagttagtgcaaacggccctaagttgcctgcctgcgattgttgatctggac
ttggcaggttacacccaagtctttgaacacggctag
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