Terrisporobacter hibernicus: JW646_07860
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Entry
JW646_07860 CDS
T07658
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tem
Terrisporobacter hibernicus
Pathway
tem03030
DNA replication
tem03430
Mismatch repair
tem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JW646_07860
03430 Mismatch repair
JW646_07860
03440 Homologous recombination
JW646_07860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tem03032
]
JW646_07860
03400 DNA repair and recombination proteins [BR:
tem03400
]
JW646_07860
Enzymes [BR:
tem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JW646_07860
DNA replication proteins [BR:
tem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JW646_07860
DNA repair and recombination proteins [BR:
tem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JW646_07860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF1836
MA3
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UEL49347
UniProt:
A0AAX2ZM04
LinkDB
All DBs
Position
complement(1633539..1637069)
Genome browser
AA seq
1176 aa
AA seq
DB search
MNKDFIHLHVHTEYSLLDGFSRLDKLIGRAKELNMKAIAITDHGCMFGAIDFYKKAKKAG
IKPVIGCEVYTASRGLRDKDPNYDKKYGHLVLLAENMTGYKNLIKLVSTSYVEGFYYKPR
VDIEELRKYSEGIIALSACLAGDVSNNILNRNYEEAKRFALLYREIFGENNFYLEIQDHH
LPEQKEVNAGLVKLSKETGIPLVATNDLHYVNKEDSKTHDVLMCIQMGKTLNDPSRMKFG
SDEFYLKSREEMEQLFPYAIEALDNTVKIAQRCNVEFDFNTYHLPKYDVPEGYTTESYLR
ELCFKGLEERYNNPTQEAIDRLNYEIDVISKMGYIEYFLITWDFINYAKENNIMVGPGRG
SAAGSIVAYTLRITDIDPIKYSLLFERFLNPERVSMPDIDIDFCYERREEVIDYVKRKYG
DDHVAQIITFGTMKAKAAIRDVGRVLDIPYNKVDKIAKEIPFDLGMTIDKALEVNPELRN
LYEQDGETKEVIDISKQMEGMLRHASTHAAGVVISKNPVDEYVPLYKHQESVSTQFTMTT
LEELGLLKMDFLGLRTLTVIRDALDLIENKYKKRIDFSSMDYDDPKVYELLSSGNTLGVF
QLESSGMRSFMKQLKPNNFEDIVAGISLYRPGPMDSIPTYIENKHNPDKITYIHESLRPI
MEVSYGCLVYQEQVMQVVRDLAGYSYGRSDLVRRAMGKKKMDVMEEERKYFIHGKEDENG
NLEIQGCIRNGVPEDIANKIFDDMIDFAKYAFNKSHAAAYGVISYETAYLKAYYPVEFMA
ALITSVMGNTDKVVEYIRECSALEIEILKPDINKSFGKFSVEGHDIRFGLAAVKNVGINV
INNIIKEREANGDFKDFADLVKRLDSKDLNKRVLESLIKCGAFDNISDNRASLMMGYEKL
LESVSMDRKKNVKGQISLFDGLQMGEEIVEVEQEVSSIPKVNEFEERERLALEKEVLGMY
VSGHPLGEYEKELKNNTSIDNGKINALKEDMEAYLNLDEKEVILGGMIVNKRIQTTKRND
IMAFLELEDLYGTIEVIVFPQVLKQYNTILNEDNIIYIKGKLSIKEEENAKLIAREIKDI
SDHDNFKINNRNNVYTKNKKPQATGIFIKVDNVKNQQLISSIEKILLQHKGKEGVYICTE
HPRRMFKWTDMEVSINSELQFELQKLLGMENVKVKN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagattttattcatcttcatgtgcatacggagtacagtttactagatggattt
tctagactagataaactaataggacgagcaaaagagctaaatatgaaagctatcgccata
acagatcacggctgtatgtttggagctatagatttttataaaaaagcaaaaaaagcagga
ataaagccagttataggatgtgaagtatacacagcatctcgtggcttaagggataaagac
ccaaactatgataaaaagtacggtcatttagttttattagctgaaaatatgacaggatat
aaaaatttaataaaattagtttcaacatcttacgttgaaggattttattacaagccaaga
gttgatatagaagaattaagaaaatatagcgaaggaattatagcattatcggcttgttta
gcaggagatgtatcaaataatattctaaatagaaactatgaagaagccaaaagatttgct
ttattatatagagaaatatttggagaaaacaatttttatttagaaatacaagaccatcat
ttgccagaacaaaaagaagtaaatgcagggctagttaaattatcaaaagaaacgggaata
cctcttgttgcaacaaacgacctgcattacgtaaataaggaagattcaaaaacccatgat
gtacttatgtgtatacaaatgggcaaaactttaaatgatccaagtagaatgaagtttgga
agtgatgaattttatttaaaatcaagagaagagatggaacaacttttcccttatgcaata
gaggctttagataatacggttaaaattgcacaaagatgtaatgttgaatttgattttaat
acttatcatttaccaaaatacgatgtaccagaaggttacacaacagaaagttacttaaga
gagctatgctttaaaggattagaggaaagatataataatcctacacaggaagcaatagat
agattaaattatgaaattgatgtaatttcaaaaatgggatatatagaatacttcttaatc
acttgggacttcataaactatgcaaaagaaaataatataatggttggtccgggaagaggt
agtgcagcaggttctatagttgcatatactttgagaataactgatatagatccaattaaa
tattcattgttatttgaacgtttcttgaatccagaacgtgtatctatgcctgatatagat
atcgatttttgctatgaaagaagagaagaagttatagattatgttaagagaaaatatggc
gatgatcatgttgctcagattataacttttggaactatgaaagcaaaagcagctatcaga
gacgttggtagagtattagatattccttataacaaagttgataaaatagcaaaagaaatt
ccttttgatttaggaatgacaattgataaagcattggaagttaatccagaactaagaaat
ttatatgagcaagatggggaaactaaagaagtaatagatatttcaaaacagatggaagga
atgttacgacatgcatctactcatgcagcgggggtagttatatcaaaaaatcctgtagat
gaatacgtaccattatataagcatcaagagtctgtgagtacccagtttacaatgactact
ttagaggaattaggtcttttgaaaatggactttttggggcttagaactcttacagttata
agagacgctcttgatttaatagaaaataaatataaaaaaagaatagatttttcttcaatg
gactatgatgatccaaaggtttatgagttactttcctcaggaaacacattaggagtgttc
caattggaaagctcaggtatgagaagtttcatgaaacagcttaagccaaataactttgaa
gatattgttgctggaatatctttatacagaccaggtcccatggattctattccaacatat
atagaaaataagcataacccagataaaataacatatatacatgaaagtttaaggcctata
atggaagtttcttatggttgcttagtttaccaagagcaagttatgcaagttgttagggat
ttagcagggtatagttatggtcgtagtgatttagttagaagagctatgggtaagaagaaa
atggatgtaatggaagaagaaagaaagtacttcatacatggaaaagaagatgaaaatggg
aatttagaaatacaaggatgtataagaaatggtgttccagaggatatagcaaataaaata
tttgatgatatgatagattttgcaaaatatgcattcaataaatctcatgcagcggcttat
ggagttatatcttatgaaacagcgtatttaaaagcatattatccagtggaatttatggca
gcattaattactagtgttatgggtaacacagataaagttgttgaatatataagagaatgt
agtgctttagaaatagaaatattaaaaccagatattaataaaagttttgggaaattctcc
gttgaaggacatgatataagatttggtttagcagctgttaaaaatgttggaataaatgta
attaacaacattataaaagaaagagaagcaaatggagactttaaagattttgctgattta
gtaaaaagattagattcaaaagatttgaataaaagagtattagaaagtttaattaaatgt
ggagcttttgacaatattagtgataatagagcgagtctaatgatgggatacgaaaaatta
ttagaaagtgtatctatggatagaaagaaaaatgtcaaaggacaaatttctctatttgat
ggtcttcaaatgggagaagaaattgtagaagttgaacaggaagttagttcaatacctaag
gtaaatgaatttgaagagagagaaagactagcattggaaaaagaagttttgggaatgtat
gttagtggtcatcctcttggagaatatgaaaaagaattgaaaaataacacatctatagat
aatgggaaaatcaatgctttaaaagaagacatggaagcatacttgaatttagatgaaaaa
gaagttattttaggtggaatgattgttaacaagaggatacaaacaactaaaagaaatgac
attatggcatttttagagttagaagatttatatggtactattgaagttattgtatttcct
caagttttaaaacaatataatactatcttaaatgaggataatattatctatataaaaggt
aagcttagtataaaagaggaagaaaatgcaaaacttatagctagagaaattaaagatata
agtgatcatgataattttaaaattaacaatcgaaataatgtatacacaaaaaataaaaag
ccacaagctacaggtatttttataaaggtagataatgtaaaaaatcaacaacttattagt
tctattgaaaaaatattgcttcaacataagggaaaagaaggtgtttacatatgtacagaa
catcctcgaagaatgtttaagtggactgatatggaagtgagtataaactctgaattacaa
tttgaattacaaaaactattaggcatggaaaacgttaaggttaaaaattag
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