Terrisporobacter hibernicus: JW646_08200
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Entry
JW646_08200 CDS
T07658
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tem
Terrisporobacter hibernicus
Pathway
tem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JW646_08200 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tem03021
]
JW646_08200 (rho)
03019 Messenger RNA biogenesis [BR:
tem03019
]
JW646_08200 (rho)
Transcription machinery [BR:
tem03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JW646_08200 (rho)
Messenger RNA biogenesis [BR:
tem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JW646_08200 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
AAA_22
NACHT
AAA_25
SAP
AAA
ResIII
HeH
Motif
Other DBs
NCBI-ProteinID:
UEL49770
UniProt:
A0AAX2ZNB1
LinkDB
All DBs
Position
complement(1699295..1700884)
Genome browser
AA seq
529 aa
AA seq
DB search
MEELSKKTLAELRQIAKDLDIKSVTKYKKNELIELINSNSKNNHEKDKKILSNNEVSTNK
EYLNEDIEAKEQKQGRENIDNSGDRNKQFINRNSDTENLKPGEKLDNRSYVKTHSRENQN
NSRNFNNNNKTSSMENRNQRNNKGNYVPKVVEESKIINEFNTSKDDEVVGVLEILPDGFG
FLRGSNYQSTDEDVYVSPSQIRRFNLQTGDKVRGITRHPKTGEKFRALLFVQKVNEENPE
TCINRKSFVNLTPIYPEERLTLEKSQNEISTRLIDLISPIGKGQRGLIVAPPKAGKTILL
KSVANSIAKNHPNVELIVLLIDERPEEVTDMRESINGDVIYSTFDQVSNHHVKVAEMVLN
RAQRLVEHGKDVVILLDSITRLARAYNLTISPTGRTLSGGLDPGALHGPKKFFGAARNIR
QGGSLTILATALVETGSRMDDVIFEEFKGTGNMELHLDRKLAEKRIFPAVDIYKSGTRRE
DLLLTEEEKTALWKLRKEMSNNSILEVTDNLIDALKKAKNNEEFIRSIK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattgagtaaaaagaccttagcagagcttagacaaatagctaaagacttagat
ataaaatcagtcactaaatacaagaaaaatgaattaattgagttaattaatagcaactca
aaaaataatcatgaaaaagacaagaaaatattaagtaataatgaagtaagcacgaataaa
gaatatcttaatgaggatatagaggctaaagaacaaaaacagggaagagaaaatatagat
aatagtggggacagaaataaacaatttattaatagaaatagtgatacggaaaatttaaaa
cctggtgaaaaattagataatagatcttatgtaaaaactcatagtagagaaaatcaaaac
aactctcgtaatttcaacaacaataataaaacttcaagtatggaaaatagaaaccagaga
aataataaaggtaattatgtaccaaaagttgttgaagaatctaaaataattaatgagttc
aacacatctaaagatgatgaagtagttggagttttagaaatacttcctgatggatttggt
ttcttaagaggatctaactatcaatctacagatgaagacgtatatgtttctccatctcaa
ataagaagatttaatcttcaaacaggggataaagttagaggtataacaagacatccaaaa
acaggagaaaagtttagagcactactatttgtacagaaagtcaatgaggagaatccagaa
acttgtataaatagaaaatcatttgttaacttaacaccaatatatccagaagaaagacta
acacttgaaaaaagtcaaaacgaaatatcaactagattaattgacttaatttcgccaata
ggaaagggacaaaggggtcttatagttgcgccaccaaaggcaggtaaaactatacttctt
aaaagtgtagctaatagcattgccaaaaaccatcctaatgtggaattaatagtattatta
atagatgaaagaccagaagaagttacagatatgagagaatctattaatggagatgttatt
tattcaacatttgaccaagtatcaaatcatcatgttaaagtagcagaaatggtattaaat
agagctcaaagacttgttgaacatggaaaagatgttgtaatacttcttgatagtataaca
agattagcaagagcttataacttaacaatatcaccaacaggaagaactttatcaggaggt
cttgacccaggagcattacatggacctaaaaaattctttggagcagctagaaatattaga
caaggtggttcattaacaatacttgccactgcattagtagaaacaggttctagaatggat
gatgtaatcttcgaagaatttaaaggaactggtaatatggagttgcatctagatagaaaa
cttgctgaaaagagaatattccctgctgtggatatttataagtcaggaacaagaagagaa
gacttactacttacagaagaagaaaaaacggctttatggaaattaagaaaagaaatgagt
aataattctatattagaagtcacagataacttaatcgatgcgctaaagaaagcaaaaaat
aatgaagaatttataagaagtattaagtaa
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