Terrisporobacter hibernicus: JW646_14835
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Entry
JW646_14835 CDS
T07658
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tem
Terrisporobacter hibernicus
Pathway
tem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JW646_14835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tem03019
]
JW646_14835
Enzymes [BR:
tem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JW646_14835
Messenger RNA biogenesis [BR:
tem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JW646_14835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
CheB_methylest
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UEL46898
UniProt:
A0AAX2ZC21
LinkDB
All DBs
Position
3069435..3070682
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AA seq
415 aa
AA seq
DB search
MQFTDLDIIRPIQKALKEEGYIKPTPIQSKSITPLLEGRDLLGCAQTGTGKTAAFAIPII
QQIYNDKKTLKGKRTIKAVILAPTRELAIQIEENFVAYARHTNIKSLVIFGGVSQNPQVK
ALKEGVDILIATPGRMLDLYNQKFLKLNDVKHFVLDEADSMLDMGMIHDVKRIISHLPKV
RQNIFFSATMPKEISKLADSIFKNPVKVEVAPVSSTTEMVEQNIYFVSKKQKTKLLIELL
KNNPKESVLVFSRTKHGANKITKDLISSSISAAAIHGNKSQNARQLALNEFKEGKIRVLV
ATDIAARGIDIDELPFVINYDLPEVAETYVHRIGRTGRAGRSGRATAFCSMEERDLYKAI
EKLINKKIEVVENHSFVASAEDVTVVAKRSNRGSRKPNRSNNKNNRSKDKFNNKN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttacagacttagacataattaggccaatacaaaaggcactaaaagaagaagga
tatataaaaccaacaccaatacaatcgaaatcaataacaccattattagaaggtagagac
ttactaggatgtgcacagactggtacgggtaaaacagcagcttttgcaattcctataata
caacaaatatataatgataaaaaaacactaaaaggcaaaagaactataaaagcagtaata
ctagcacctacaagagaactagcaatacaaatagaagagaactttgtggcttatgcaaga
catacaaatataaagagtttggttatatttggaggagtatctcaaaaccctcaagttaaa
gcattaaaagaaggtgtagatatattaatagctactccaggtagaatgcttgatttatac
aatcaaaaattcttaaaattgaatgatgttaagcactttgttttagatgaagctgatagt
atgttagatatgggtatgatacatgatgtaaaaagaataattagccacctgccaaaggtt
aggcaaaacatattcttctctgctactatgccaaaagaaatatcaaaattagcagattca
atatttaaaaatccagttaaggtggaagttgcaccagtatcatcaacaactgagatggtt
gaacaaaatatttattttgtaagtaaaaaacaaaagacaaagttacttatagagttatta
aaaaataatccaaaagaatctgtacttgtattttctagaacaaaacatggagcaaataaa
ataacaaaagatctaatatcatcatcaataagtgcggctgcaatacatggtaataaatct
caaaatgcaagacaactagcattaaatgagtttaaagaaggtaaaattagagtattggta
gcaactgatatagcagcaagaggaattgatattgatgaactaccatttgtaataaattat
gatttgccagaagttgcagagacttatgttcatagaattggaagaacaggaagagcggga
agaagtggtagagcaacagcattttgttcaatggaagaaagagatctttataaggctata
gaaaaacttataaataaaaagattgaagttgtagaaaatcatagttttgtagctagtgca
gaggatgtaactgtagtagctaaaagaagtaataggggcagtagaaaacctaatagaagt
aacaataaaaataatagaagtaaagataaatttaacaataaaaattaa
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