Terrisporobacter hibernicus: JW646_15125
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Entry
JW646_15125 CDS
T07658
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tem
Terrisporobacter hibernicus
Pathway
tem03030
DNA replication
tem03430
Mismatch repair
tem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JW646_15125
03430 Mismatch repair
JW646_15125
03440 Homologous recombination
JW646_15125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tem03032
]
JW646_15125
03400 DNA repair and recombination proteins [BR:
tem03400
]
JW646_15125
Enzymes [BR:
tem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JW646_15125
DNA replication proteins [BR:
tem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JW646_15125
DNA repair and recombination proteins [BR:
tem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JW646_15125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
Rv2179c-like
RNase_H_2
DEDDh_C
HHH_3
FKBP_C
Motif
Other DBs
NCBI-ProteinID:
UEL46955
LinkDB
All DBs
Position
3131400..3135695
Genome browser
AA seq
1431 aa
AA seq
DB search
MDNIKDYLEKLEIKNSRLEKQLKEVQVSKVVYFKEEKIFYMYLVSKDIISHEILDELREE
LLGKLKYFKNIRLKIKFNGFGRKSDKDIVKNYWHNILYILKKICPAIEGWKKQVEYMCLD
NMLKIKIPKDIFYEKLKKNNIEDVIRNVLLEELGIDYQVKVEKAVSDKTDIKKLIEKTDK
EIEDLIKEMEFEVVDEDNEEESYVIKDEYDEHLIYGEDVNSLVHPIKDLNQKSKTVAIIG
EIFNIENKELRNGKILSIMSITDNTSSINCKLFLNDLNKDKVLDSVKEGSYVKIKGDVLY
DTYQREITMTISGIRQEEKPKRKDICEKGKRVELHAHTQMSSMDALSPAKKLVKQAADWG
HKAIAITDHGVVQAFPEAMDAGKANNIKILYGVEGYLVEDNLPVIQKANDKDLSQTFIVF
DLETTGFSNKNDKITEIGAVKVENFKIVDRFSQLINPEKDISYKVQELTGITNDLIKDKP
TIEEILPKFIEFIGDSVLVAHNADFDMGFMQQKCREQNIEFKNTSVDTLTLARTLLPHMK
RFRLNLIAKELGIPLLNHHRAVDDAEATAHIFIKFLEMIKKKGAEKLSDVNMILGDIDYT
KLRTNHVTLIAKNQIGVKNLYKIVSDAHVNHFYRAPRILKSVLEEYKEGIIIGSACEAGE
VFQAVKQNKSDEDLERIISLYDYIEVMPIDNNRFMIDKGEVKDEEELKDLNRRMIEVAKN
FGKIPVATGDVHFIDKHEAIYRKVLKYSQGFKIDEEETYLHFRTTDEMLDEFKYLGEDLA
YEVVVENTNKVADMIEDILPIPNATFPPVIEGSDKELREMCNAKAERIYGCPLPDVVRKR
LDRELNSIISNGYAVMYIIAQKLVTKSLADGYLVGSRGSVGSSLAATMSDITEVNPLPAH
YICENSQCKYSYFYEIGEWGSGVDLPAKDCPKCGRPLKKDGHDIPFEVFLGFEGDKEPDI
DLNFSGSYQPVIHKYTEELFGEGHVYRAGTIGTVAEKTAFGYAKKFVEENDLNSTSAEVL
RLANGCTGVKRTSGQHPGGVMVIPDYKDVYDITPIQYPANDTSCGVITTHFDYHSISGRI
LKLDILGHDVPTIIRMIEDITGKIATEIPLDDKETMSLFTSTDALGVTPEEINCPIGCLA
IPEFGTKFVRQMLLDTKPTTFAELVRISGLSHGTDVWLNNAQDLVVEGTVEFKEVISTRD
DIMNYLIFKGLPPKMAFTIMESVRKGKGLKPEFIEEMKKNDVPDWYIGSCQKIKYMFPKA
HAVAYVMMSFRLAYYKVHYPEAFYATYFTTKAEDFDADLIVKGLDSIRNKMDEIISLGND
ATAKEKNMLTVLEVAYEMYARNIKILPVDIYKSDATEFKVMGENQILPPMIALQGVGENA
AIHIQQERENGEFISKEDLRKRTKISKTVIETLTNHGSLDNMSDKNQLSLF
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggataatattaaagactatttagaaaaactagaaattaaaaatagtagattagaaaag
caattaaaagaagtacaagtatccaaagtagtatacttcaaggaagaaaaaattttttat
atgtatttagtgtcaaaggatattatatcgcatgagattttagatgaacttagagaagag
ctattaggcaaattgaaatattttaaaaatattaggctcaaaattaagttcaatggtttt
ggcagaaaatcggataaagatatagtgaaaaactattggcataatattttatatatatta
aaaaaaatctgtccagctattgaaggatggaaaaaacaagtagagtacatgtgtttagat
aatatgctaaagataaagattcctaaagatattttttatgaaaaactaaaaaagaataat
atagaagatgttataagaaatgtattattagaagaattgggaattgactatcaggttaaa
gttgaaaaagcagttagtgataagacggatataaaaaagttaatagaaaaaacagataaa
gaaattgaagatttaataaaagaaatggaatttgaagtagtagatgaagataatgaagaa
gaaagttatgtaattaaggatgaatatgatgaacatttaatttatggtgaagatgttaat
agtttagtacatccaataaaagatcttaatcaaaaatctaagacagtagcaatcataggt
gaaatatttaatatagaaaataaagaattgagaaatggtaaaatactttcaattatgtct
atcacagataatacaagctctattaattgtaagttgtttttaaatgacttgaacaaggat
aaggtgttagatagtgtaaaagaaggatcttatgtaaaaattaaaggtgacgtattatat
gatacttatcaaagagaaatcactatgactataagtggtatcagacaagaagaaaaacca
aaaagaaaagatatttgtgaaaaaggcaaaagagttgagttacatgctcatactcaaatg
tcttcgatggatgctttatctcctgcaaaaaaactagttaaacaagcagctgattggggg
cataaggcaatcgccataacagatcacggtgttgttcaagctttcccagaagccatggat
gcagggaaagctaacaatataaaaatactctatggagtagaaggttatttagtagaagat
aatttacctgtaatacaaaaggcaaatgataaagacttatctcaaacattcatagtattt
gacttagaaactacaggtttttcaaataaaaatgataaaattacagaaataggtgcagta
aaagtagaaaactttaaaattgtagatagatttagccaattgataaatcctgagaaggat
atttcttataaagtccaagaacttactggcattacaaatgacttaataaaagataaacct
actattgaagaaatattaccaaagtttattgaatttataggagatagtgtgttagttgct
cacaatgcagacttcgatatggggtttatgcaacaaaaatgtagagaacaaaatatcgaa
tttaaaaatacatcagttgatacattaacattagcaagaaccctacttcctcatatgaaa
agatttagattaaaccttatagctaaggaattaggaattccattgcttaatcatcataga
gctgtagatgatgcagaagctactgcacatatatttattaaatttttagaaatgataaaa
aagaagggtgcagaaaaattaagcgatgtaaatatgattttaggagatatagattatact
aaattaagaacaaatcatgtaacattaattgctaaaaatcaaattggggtaaaaaattta
tataaaatagtatctgatgctcatgtaaaccacttttatagagcgcctagaatattaaaa
agtgttttagaggaatataaagaaggaataataattggctcagcttgtgaagctggggag
gtttttcaagctgtaaaacaaaataaaagcgatgaagacttagagcgaataatatctctt
tatgattatattgaagttatgccaattgataataatagatttatgattgataaaggtgaa
gttaaagatgaagaagaattaaaagatttaaatagaagaatgattgaagtggcaaagaac
tttggaaaaattcctgtagctacaggagatgtacactttatagataaacatgaagctatt
tatagaaaagtgcttaaatactcacaaggttttaagatagatgaagaggaaacttatctt
cattttagaacaacagacgaaatgctagatgaattcaaatatctaggagaagatttagca
tatgaggttgtagtagaaaatacaaataaggtagcagatatgattgaagatatacttcca
atacctaatgcaacttttccaccagtaattgaaggttctgataaagaacttagagagatg
tgtaatgctaaggcagagaggatttatggatgccctctcccagacgttgtgagaaaaaga
cttgatagagagttaaattcgattataagtaatggttatgcagtgatgtatattatagct
caaaaactagttacaaaatctcttgcagatggatacctagttggttctaggggatctgta
gggtcttcccttgcggctacaatgagtgatataactgaagttaatccgctgccagcacat
tatatttgtgaaaattcacagtgtaagtattcttatttctatgaaataggtgaatggggt
tctggagtggatttaccggcaaaggattgtcctaaatgtggaagaccattaaaaaaagat
ggacatgatataccttttgaggttttccttggatttgaaggagataaggaaccagatatt
gaccttaacttctcaggaagttatcaacctgtaattcataaatatacagaagaacttttc
ggagaaggtcatgtatatagagcaggaacaataggtactgttgcagaaaaaactgctttt
ggttatgctaagaaattcgtagaagaaaatgatttaaattcaacatcagcagaagtttta
agacttgcaaatggatgtacaggagtaaaaagaacttcaggacaacaccccggtggagtt
atggttataccagactacaaagatgtttatgatataacacctatacaatatccagccaac
gatactagctgtggagttataactacacactttgactatcactctataagtggtaggata
ctaaagcttgatatattaggacacgacgttcccaccatcatcagaatgatagaagatatt
acaggtaagattgccacagaaatacctctagatgataaagaaacaatgtcattatttaca
tctacagatgctttaggtgtaacaccggaggagattaactgtccaataggttgtcttgct
atacctgaatttggaacaaaattcgttagacaaatgcttcttgatacaaagccaacaaca
tttgcagagcttgtacgtatatcaggattatctcatggtactgatgtttggttaaataat
gcacaagacttggttgtggaaggtacagttgaatttaaagaagttatatcaacacgtgat
gatataatgaactacttaatatttaaagggcttccaccaaagatggcatttaccataatg
gaaagtgttagaaaaggtaaaggattgaaacctgaatttattgaagaaatgaaaaaaaat
gatgtgccagattggtatataggttcatgtcaaaagataaaatacatgttccctaaagct
catgctgttgcttatgtaatgatgagttttaggctggcttattataaagtgcattatcca
gaagcattttatgccacatattttacaaccaaagcagaagattttgatgctgacttaatt
gtaaaaggactagattctataagaaacaaaatggatgaaattatttctctaggtaatgat
gcaacggctaaagaaaaaaatatgctgacagttcttgaagttgcttatgagatgtatgca
aggaatataaaaattcttccagtagatatttacaaatcagatgcaactgagtttaaagtt
atgggagaaaatcaaattctacctcctatgatagctttgcaaggggtaggagagaatgca
gctatacacatacagcaagaaagagaaaatggtgagtttatatccaaagaagatttaaga
aagagaactaaaatttcaaaaactgttattgaaactctaactaatcatggatcgttagac
aatatgagtgataaaaatcaactttcattattttaa
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