Terrisporobacter hibernicus: JW646_19955
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Entry
JW646_19955 CDS
T07658
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tem
Terrisporobacter hibernicus
Pathway
tem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JW646_19955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tem03019
]
JW646_19955
03009 Ribosome biogenesis [BR:
tem03009
]
JW646_19955
Enzymes [BR:
tem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JW646_19955
Messenger RNA biogenesis [BR:
tem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JW646_19955
Ribosome biogenesis [BR:
tem03009
]
Prokaryotic type
rRNA helicases
JW646_19955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
Helicase_RecD
ERCC3_RAD25_C
WHD_MCM8
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UEL47864
UniProt:
A0AAX2ZEW1
LinkDB
All DBs
Position
complement(4085376..4086824)
Genome browser
AA seq
482 aa
AA seq
DB search
MTKTNFKDYKLSKEILKSLEMLNFKNPTKVQEQVIPVALQNKDILVKSQTGSGKTATFGI
PLCELVDWDENKPQALVLAPTRELAIQVKDDIFNIGRFKRIKACALYGKSSFAVQEKELK
QKTHIVVGTPGRTIDHIKEGSFVTDNIKYLVIDEADEMLSLGFIEQIEEIIEALPSKRVT
MLFSATLPEDIDELSKRYLKNPTKIEIAAKTLTVDRIVQVAYKVEENAKLNLLKDVTIVE
NPDSCMIFANTQRKVEAIYEELTDLKYPCDKIHGGMEQDDRIKVMSNFKKGYFRYLIATD
VAARGIDIDNITHVINFDIPVLRENYVHRIGRTGRAGKEGRAITFVTKADDRRLSEINSY
TGRELVLRQETPSRKSVKKLKAEFERKLSEKPKVKMSKGASMSCEIMRLHINAGKKTKMR
PVDIVGTLCSIEGMTAEDIGVINVQDVSTFVEVLNNKGDMVLKALQTKNIKGRPRKVTKV
EM
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaactttaaagattataaattaagtaaggaaatattaaaatcactagaa
atgttaaatttcaaaaatccaacaaaagttcaagagcaagttataccagtagctctacaa
aacaaagatatacttgtaaaatcacaaacaggaagtggaaagactgcaacttttggaata
cctttatgtgagttggtagactgggatgaaaataagcctcaagccttagttttagcaccg
accagagaactggcaatacaagtgaaagacgatatatttaatataggtagattcaaaaga
ataaaagcttgtgccctttatggaaagtcttcatttgctgttcaagaaaaagaacttaag
caaaagactcatatagtagttggaacgccaggaagaacaattgatcatataaaagaagga
agctttgttactgataatattaaatatcttgtaatagacgaagctgatgaaatgcttagt
ttaggatttattgaacaaatagaagagataatagaagctcttccttctaagcgtgttacc
atgttattttctgccacattgccagaagatatagatgagttatcaaaaagatatttaaaa
aatcctactaaaatagaaatagcagctaaaactttaacagttgatagaatagtacaagta
gcttataaagtagaagaaaatgcaaaactaaatttattaaaagatgttacaatagttgaa
aatccagatagctgtatgatttttgccaacactcaaagaaaagtagaagctatttatgag
gagttaacagatttaaaatatccatgtgacaaaatacatggaggtatggaacaagatgac
agaataaaagtaatgtctaacttcaaaaaaggatatttcagatatttaatagcgacagat
gtggcagctaggggtatagatatagataatattactcatgtaataaactttgacatacca
gttcttagagagaactatgttcatagaataggaagaacaggtcgtgcaggtaaagagggt
agagcaattacctttgtaactaaagctgatgacagacgtttatctgaaattaattcatat
acaggaagagaactagttttaagacaagaaactccaagtagaaaatctgtaaagaaatta
aaagctgaatttgaaagaaaattaagtgagaaacctaaagtaaaaatgagtaagggtgca
agtatgagttgtgagataatgagacttcacataaatgctgggaaaaagacaaagatgaga
ccagttgatatagttggaacactttgtagtatagaaggaatgacagcagaggatatagga
gttataaatgtgcaggatgtatctacttttgtggaagttttaaataacaaaggtgacatg
gtacttaaggcattacaaactaaaaacatcaagggaagacctcgtaaggttactaaggtg
gagatgtaa
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