Tunturiibacter empetritectus: RBB75_00585
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Entry
RBB75_00585 CDS
T10212
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
temp Tunturiibacter empetritectus
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
temp03032
]
RBB75_00585
03036 Chromosome and associated proteins [BR:
temp03036
]
RBB75_00585
03400 DNA repair and recombination proteins [BR:
temp03400
]
RBB75_00585
DNA replication proteins [BR:
temp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RBB75_00585
Chromosome and associated proteins [BR:
temp03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RBB75_00585
DNA repair and recombination proteins [BR:
temp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RBB75_00585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
XCB26838
UniProt:
A0AAU7ZDR8
LinkDB
All DBs
Position
200092..200451
Genome browser
AA seq
119 aa
AA seq
DB search
MTKADLVDKVTSLGDLTRRDGEVIVDTLFDAVIGALKTGDKIEIRGFGSFRTRQRNARTG
RNPKTGAKVDVPAKRVPFFKPSKELRDSVNPNGAVKSRPAAAKKAVDEEHIDPHHPPAM
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagccgaccttgttgataaagtgacctctcttggagacctgacccgccgtgac
ggggaggttatcgtcgatacgctcttcgatgctgtcattggagctctgaagaccggtgac
aagatcgagattcgcggcttcggaagctttcggacccgccagcgaaatgcccggacgggc
cgaaacccaaagactggagccaaggtcgatgttccagcgaagcgggttcccttcttcaag
ccgtcgaaggaacttcgtgactcggtgaatccgaacggcgctgtgaaatctcgacctgca
gctgcgaaaaaagcggttgacgaagagcacatcgacccacatcatcccccggcaatgtaa
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