Tunturiibacter empetritectus: RBB75_02350
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Entry
RBB75_02350 CDS
T10212
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
temp Tunturiibacter empetritectus
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
temp03019
]
RBB75_02350
Messenger RNA biogenesis [BR:
temp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RBB75_02350
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
Cas3_HD
RMI2
Motif
Other DBs
NCBI-ProteinID:
XCB27174
UniProt:
A0AAU7ZFN8
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Position
complement(601048..602028)
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AA seq
326 aa
AA seq
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MKDFFVEDAARFDNATVTTYFVLTSMQVRDKKQGGQYLALMVSDKTGSLEARMWDDVTEA
VATCDEGCYVKVQGDISRYQGKFQITLKKLRLAAESEVDPKDFQPSTKFDVEQMWGELRG
YVSAFRNLELQRLVFAFLDDEQIGPAFKAAPAAKRLHHAWLGGLLEHVLTLVRVCLGTAP
FYPEVDADLLVTGAILHDIGKIRELSWGSSFSYTLEGQMIGHISIAQGMLREKVQQLAPF
PEKLRVLVEHMILSHHGKYEFGSPKLPMTPEAILLSALDDLEAKMQAMRNEFAAAVASGK
SSGEVTDWVRSMDRPLLNTQGYLKDE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttttttgttgaagatgcggcgcggttcgataacgcgacagtcacgacttac
tttgttttgacgtcgatgcaggtgagagacaagaagcaggggggacagtatcttgcgttg
atggtgagcgataagacgggatcgcttgaagcgcgtatgtgggatgacgtgacagaggcg
gttgcgacctgtgacgaaggctgctatgtgaaggtgcagggggatatctccaggtatcag
gggaagttccagatcacgttgaagaagctgcggctggcggcggagtcggaggtcgatccg
aaggactttcagccttcgacgaagttcgatgtggagcagatgtggggggagctacggggg
tatgtctctgctttcaggaatttagagttgcaacgactggtgtttgcgtttcttgatgat
gagcagataggccctgcgttcaaggcggctcctgcggcgaagcggctgcatcatgcgtgg
cttggcgggttgctggaacatgtgctgacgctggtgcgggtgtgtctggggacggctccg
ttttatccggaggtggatgcggatctgctggttacgggggcgattttgcatgatattggt
aagattcgcgagctttcctggggttcgagcttcagctatacgctggaagggcagatgatt
gggcatatcagcattgcgcaggggatgttgcgggagaaggtgcagcaactggcgccgttt
ccggagaagctgcgggtgctggtggagcatatgattctgagccatcatgggaagtatgag
tttggttcgccgaagctgccgatgacgccggaggctattcttttgagtgcgttggatgac
cttgaggcgaagatgcaggcgatgcggaatgagtttgcggcggcggtggcgagtgggaag
agcagcggcgaggtgaccgactgggtgaggagtatggatcggcctctgctgaatactcag
ggatatttgaaggacgagtag
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