Tunturiibacter empetritectus: RBB75_06730
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Entry
RBB75_06730 CDS
T10212
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
temp Tunturiibacter empetritectus
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
temp03032
]
RBB75_06730
03400 DNA repair and recombination proteins [BR:
temp03400
]
RBB75_06730
Enzymes [BR:
temp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RBB75_06730
DNA replication proteins [BR:
temp03032
]
Prokaryotic type
DNA Topoisomerases
RBB75_06730
DNA repair and recombination proteins [BR:
temp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBB75_06730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XCB28012
UniProt:
A0AAU7ZGT5
LinkDB
All DBs
Position
complement(1627772..1628854)
Genome browser
AA seq
360 aa
AA seq
DB search
MPRKKQLQIVTDPEESAKAAGLRYVTDTKPGIQRKPWRKSFHYFNADGTPVHEAETLARI
KSIVIPPAWKEVWICPNPKGHLQVTGRDARGRKQSRYHPRWREVRDETKYERMVVFGAAL
PAIRERVEHDLSTPGLPRPKVLATIVRLMETTLIRVGNEEYARQNHSYGLTTMRNKHVDV
EGSTVTFNFQGKSGVKHTVDITDRRIAKIVQRCQDIPGYELFQYVDKDGTQHSIDSSDVN
DYLREIAGQDFTAKDFRTWAGSVLACDLLHEFEAFESETQAKRNVVQAIKSVAARLGNTP
SVCRKCYVHPAVLDSYMSGAMLKSVKRTIEEKDIDSSHELRQQESALLDVLRRQVDRAVA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaagaaacagctacaaatagtcaccgatcctgaggagtcagcaaaagcagca
ggtctgcgctacgtcaccgacacgaaacccggaattcaacgcaaaccctggcgcaaaagt
tttcattacttcaacgccgatggaacccctgtgcatgaggccgagactttagctcgcatc
aagtccatcgtcatccctccagcttggaaagaggtatggatctgccctaatccaaaagga
catctccaggtcaccggtcgcgacgcaagggggagaaagcagagccgctaccatccccgc
tggcgcgaagtccgcgacgagaccaagtacgagcgcatggtcgtcttcggagccgccctg
ccagctatccgggagcgggtagaacacgacctctcaacacccggtctgcctcgtccaaag
gttttggccaccatcgttcgtctcatggagacaaccctcatccgcgtcggcaacgaggag
tacgctcgccaaaaccactcctacggcctaaccacaatgcgaaataaacacgttgatgtc
gagggctctaccgtaaccttcaacttccagggtaagagcggagtcaaacataccgtcgac
ataactgatcgccgcatcgcaaagatcgtccaacggtgtcaggacatacccggatatgag
ctatttcagtacgtcgacaaagatggtactcagcactccatcgattcatccgacgtcaat
gactatctccgcgagatcgcggggcaggacttcaccgcaaaagacttccgcacctgggcc
gggagcgtactggcttgcgacttgctgcatgagttcgaggcattcgaatccgaaacgcaa
gctaagcgaaacgtagttcaggcaatcaaatccgtcgccgcgcgactcggcaacacacca
tctgtctgtagaaagtgttacgtgcaccccgcagttctcgactcctatatgagcggagcg
atgctgaagagtgttaaacgcaccatcgaagagaaagacattgactcctcccacgagcta
cgacaacaggagtccgctcttctggatgttctgcgtcgccaggtcgaccgtgcagttgct
tga
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