Tunturiibacter empetritectus: RBB75_10360
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Entry
RBB75_10360 CDS
T10212
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
temp Tunturiibacter empetritectus
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
temp03009
]
RBB75_10360 (rlmD)
Enzymes [BR:
temp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RBB75_10360 (rlmD)
Ribosome biogenesis [BR:
temp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RBB75_10360 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
TRM5-TYW2_MTfase
RrnaAD
FlpD
Motif
Other DBs
NCBI-ProteinID:
XCB24862
UniProt:
A0AAU7Z7Y3
LinkDB
All DBs
Position
complement(2566497..2567789)
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AA seq
430 aa
AA seq
DB search
MKLQIEKAIYGGACLAHQSDGDSVFIPFVLPGELVEVQIQQQKKNFEEASLLQVLEDSVD
RVQPACPHFGECGGCHYQHTQYPAQVKMKASILQETLERAGLKTLPEIQLHSAAPWAYRN
RMRLRLEELDSILKVGYNRQGTNVFLAIQECPITAPLLWRAAQSLLQVATENTASSRWLL
NAVEAEFFTTADEKKLQMTVFVRKDQPGLAPLCDRMKQLVPELTGAGTSLLKPAGPQRQL
QKPRPLESWGAQGLSYQAGNEDYWVSRGAFFQVNRFLIEELVRIVATNRQGQLAWDLYAG
VGLFSRALAKTFQQVVAVEAAATDLIKSFKGTGRHAIEATTIEFLRQAVVQRERPQLIVV
DPPRAGVGAEVCALLARVAAPEIVYVSCDPVTLARDLKMLVDAGYNLEELHLVDLFPQTF
HLETIVILRR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaagttacaaattgaaaaagcaatctatggcggagcttgccttgctcatcagtccgat
ggagattctgtctttatacccttcgtgctaccaggcgaattggtcgaggtccagattcag
cagcagaaaaagaactttgaggaagcctctcttctgcaggtgctggaggattcggtagac
cgtgtccagccagcgtgtccacacttcggagagtgtggtggatgtcactaccagcacacc
caatatcccgcgcaggtgaagatgaaggcatccatcctgcaggagacgctcgaacgtgcc
gggttgaaaacgctacctgagattcagcttcattccgcggctccctgggcttacagaaat
cgtatgcgcctgcggctcgaagagctggactccatcctgaaagtcggctacaaccggcag
ggcaccaatgtgtttcttgcgattcaggagtgccccatcactgcgccgttgctgtggcgc
gcggctcaaagcctcttgcaagtggcgacagagaacactgcttcaagtcgctggctactc
aacgctgtcgaagcggagttttttacaacagccgacgaaaagaagctgcagatgaccgtc
tttgtccgaaaagatcaacctgggttagccccattgtgtgaccgcatgaaacagctcgtg
ccagagctcacgggagctggcacctctctcctaaaacccgcaggaccacagcgacagcta
cagaagccgcgtcctttagagagttggggagcacaaggcttgagttatcaggcaggaaac
gaagactactgggtgagccgcggcgccttcttccaggtcaaccgctttctcatcgaggag
cttgtccggatcgtcgcaacaaatcgtcagggacaactagcatgggatctatacgcaggc
gtgggattattttctcgagcactggcgaagacgtttcagcaggtcgtagccgtcgaagcc
gccgccaccgatctgatcaaatccttcaaaggaacaggcaggcacgccatcgaagccacc
accattgaattcctccgtcaggctgtggtgcagcgagaacgccctcagttgatcgtcgtt
gaccctccgcgggccggtgtcggagccgaggtttgcgcactcctcgcgcgcgttgcggcc
cccgagatcgtctacgtctcctgcgatcccgtaactctggctcgagacctgaaaatgctg
gtagacgcgggctacaacctcgaagaactccacttggtcgacctgtttcctcagacgttt
catcttgagacgatcgtgattctgcgcagataa
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