Tunturiibacter empetritectus: RBB75_10760
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Entry
RBB75_10760 CDS
T10212
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
temp Tunturiibacter empetritectus
Pathway
temp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBB75_10760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
temp03019
]
RBB75_10760
Enzymes [BR:
temp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RBB75_10760
Messenger RNA biogenesis [BR:
temp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBB75_10760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
XCB24941
UniProt:
A0AAU7Z7N6
LinkDB
All DBs
Position
2653927..2655459
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AA seq
510 aa
AA seq
DB search
MNSATLDATEQNNEITSKHQHSAPEANTAVANPAGLPLVEDVRFTDFNISDSLKTRLTNA
GFTMPTPVQAKAIPPALEGNDILATASTGTGKTLSFLIPMIQRMDANSVPSTKGKRGPIR
SLILLPTRELAMQVLEAYWKLVPGSKSDAVLVCGGLSENNQLDQLDRGPRLVVATPGRLE
DFLRRREININSVEMLVLDEVDRMLDMGFLPAIRRIVGALPKTRQTMCYSATLDANIREI
VRDYVNKPVRIEIGQTSKPSDRVELRVYTVMQDQKLGLLDQMLRQEEGTFLVFSRTKHGA
DRISKKLEKLGHDADVIHGDRSQSQRTAALKGFATGRHRVLVATDVAARGIDVQDIAHVV
NYDLPNASDDFVHRIGRTGRAGKKGVATTFVMPQERHDARKLERELKIKFEWREADKNLE
KEVRNAPLDTTAQGQDLMQLETRSWKGNDPVTPMTTPNANYGGNKSGFRSRNGGGGFSGG
RNSGGRGPGGRPNSNSRPGSSRSGPARRGQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgaactccgcaactctagacgcaacagaacagaataatgagatcacttcgaaacaccag
cactccgctcccgaagccaacaccgccgtcgcgaatcccgcaggcctccctctcgttgag
gatgttcgcttcaccgacttcaacatctcggattcgcttaagacccgcctcaccaacgcc
ggcttcaccatgccgaccccggtgcaggccaaggccatcccgcccgcgctcgaaggcaac
gacatcctcgccactgcctccaccggcaccggcaagaccctcagcttcctcatcccgatg
atccagcgcatggacgcaaactccgtccccagcaccaagggcaagcgcggtcccatccgt
tccctcatcctgctgccgacgcgcgaactcgccatgcaggtcctcgaggcctattggaag
ctcgttcccggctcgaagagcgacgctgtgctcgtctgtggcggtctctccgagaacaac
cagctcgaccagctcgaccgcggcccccgtctcgtcgtcgccacccctggccgcctcgaa
gacttcctccgccgtcgcgagatcaacatcaactccgtcgagatgctcgtgcttgatgaa
gtcgatcgcatgctcgacatgggcttccttcccgccatccgccgcatcgtcggcgcgctg
ccgaagacccgtcagaccatgtgctactccgcgaccctcgacgccaacatccgcgagatc
gtccgcgactatgtcaacaagcccgtccgcatcgagatcggccagacctcaaagccgtcc
gaccgtgtcgaactccgcgtctacaccgtcatgcaggaccagaagctcggcctgctcgac
cagatgctgcgccaggaagagggaaccttcctcgtcttctcgcgcaccaagcatggtgct
gaccgcatctcgaagaagctcgagaagctgggccacgatgccgacgtcatccacggcgac
cgcagccagtcccagcgcaccgccgctctgaagggctttgccaccggccgtcaccgcgtc
ctggttgcaaccgacgtagccgctcgcggcatcgacgtgcaggacatcgcacacgtcgtc
aactacgacctgcccaacgcctcggacgacttcgtccaccgcatcggccgcactggccgc
gccggcaagaagggcgtcgccaccacctttgtcatgccccaggagcgtcacgacgcccgc
aagctcgagcgcgaactaaagataaagtttgagtggcgcgaagccgataagaaccttgag
aaggaagtccgcaacgcacccctcgacacaacagctcagggacaggacctcatgcagctt
gaaacccgctcctggaagggcaacgatcccgtcacaccgatgacgacgcccaacgccaac
tatggcggcaacaagagtggcttccgcagccgcaacggtggcggcggcttctctggcgga
cgtaactccggtggccgtggccccggtggccgtcccaacagcaacagccgccccggcagc
agccgctccggcccagcccgccgcggtcagtaa
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