Tunturiibacter empetritectus: RBB75_13935
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Entry
RBB75_13935 CDS
T10212
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
temp Tunturiibacter empetritectus
Pathway
temp03020
RNA polymerase
Brite
Enzymes [BR:
temp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBB75_13935 (rpoC)
Transcription machinery [BR:
temp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBB75_13935 (rpoC)
DNA repair and recombination proteins [BR:
temp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBB75_13935 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCB25537
UniProt:
A0AAU7Z9W5
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All DBs
Position
3400572..3404762
Genome browser
AA seq
1396 aa
AA seq
DB search
MFRSSPFELTGPIADFDAIKIQLASPEKIRSWSHGEVTKPETINYRTFKPERDGLFCARI
FGPITDWECLCGKYKRMKHRGVICDKCGVEVTLSKVRRERLGHIELASPCSHVWFFKGLP
SRIGHLLDISLRELEAVLYFESYVVVDPGDAPVKEREVIKDETKFRELDQQYRPSGFKAM
MGAEAIKELLKRVEVTELAIELRERMKTETSLQKKLKYSKRLKIVEAFRKSDNLPQWMIL
DVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKKLMDLHAPEVIVRNEKRML
QEAVDALFDNGRRGRVLRGANNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYHRLEQTGHCTTIKQAKEMVEMQEPIVWDILEEVIKDH
PVLLNRAPTLHRLGIQAFEPVLVEGKAIKIHPLVCTAFNADFDGDQMAVHIPLSPEAQIE
ASVLMLASHNILSPASGQPITVPTQDLVLGLYYLTKAKVNAKGEGRVFANIEEVFMALEA
KQVETLTPIRLRYTGPVLDMTTAYDDQDLTHTEPVEFNNQFISTTVGRAILNDALPEGMP
YVNGLLKKKGIGQLINYCYLNLGLEVTVKTLDRVKDLGFTYATRSGLSVGLDDMVIPDSK
YTLVGEAEKTVLAMQQQYLDGAITNGERSNKVIQMWSGVTERVADEMFNNMKRADKEGAM
NPIYIMADSGARGSKQQIRQLSGMRGLMAKPSGEIIETPITANFREGLTVLQYFISTHGA
RKGLADTALKTADSGYLTRRLVDVAQDVIISHNDCGTVEGIYVTPIIEAGETIEPLRDRI
IGRVSLEKLKDFEGKTIVDVNQEIDEDLASAVQAAGIERVKIRSVLTCESKRGVCILCYG
RNLGSGKMVEMGEAVGVIAAQSIGEPGTQLTMRTFHIGGTASRVSDASHLESKNIGTVRF
INLVTVRSKDGGLVAFNRNGSLAIVDEKGREKERYAVVYGAKLKVEEGQQVVQGTRLGEW
DPYTFSLLTEIAGTVQFKDLQEGLTLNEEVDEVTGLSRLVVTDSSDEKRQPAIIIKSAQG
NKRYLMPSRAHLMVADGDEIFPGDILAKIPRETTRTKDITGGLPRVVELFEARKPRDPAI
ISKIDGVVRFGEVSKGQRKVYVTADNGQEEEYSVPRGTYVNVQEGERLRAGDALIDGPRN
PHDILEVLGERALQQYLVNEIQEVYRLQGVTISDKHIETIVRQMLRWVKIEEVGDTTFLV
DQQTDRFRFNAENQRVLMSGGKPAIGRSLLLGITKASLSTDSFISAASFQETTRVLTEAS
INGSIDTLRGLKENVIVGRLIPAGTGMEYYRNVQLSPELEEAAAQVQQEVASAIEAEERE
LEQMRMEGEQEELAAE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgctccagcccctttgaactgaccggacccatcgccgacttcgacgccatcaag
atccagctcgccagccctgagaagatccgcagctggtcgcacggcgaggtcaccaagccc
gaaaccatcaactaccgcaccttcaagcccgagcgcgacgggctcttctgcgcaagaatc
tttggccccatcaccgactgggagtgcctctgtggcaagtacaagcgcatgaagcaccgc
ggcgtcatctgcgacaagtgcggcgttgaagtcaccctctcgaaggttcgccgcgagcgc
cttggacacatcgaactcgccagcccctgctcgcacgtctggttcttcaagggcctgccc
tcgcgcatcggccacctgctcgacatcagcctgcgtgagctcgaggctgtcctctacttc
gagtcttacgtcgtcgtcgatccaggcgatgcgccggtcaaagagcgcgaagttatcaag
gacgagaccaagttccgcgaacttgaccagcagtaccgcccctccggcttcaaagccatg
atgggcgctgaggccatcaaggaactcctcaagcgcgtggaagtcaccgagctcgccatt
gagctgcgcgagcgcatgaagaccgagacctcgctgcagaagaagctcaagtactccaag
cgtctcaagatcgtcgaagctttccgcaagtccgacaacctgccgcagtggatgatcctc
gacgtgatccccgtgatcccacccgagcttcgccccctcgtcccgctcgacggcggacgc
ttcgccacgtccgacttgaacgatctctatcgccgcgtcatcaaccgtaacaaccgcctc
aagaagctgatggacctccatgcacctgaggtcatcgtccgcaacgagaagcgtatgttg
caggaggccgtcgatgctctgtttgacaacggccgtcgtggtcgcgttctccgcggcgcg
aacaaccgtccgctgaagtcgctctccgacaccctcaagggcaaacagggccgcttccgt
cagaacctcctcggtaagcgcgtcgactactccggccgttcggtcatcgtagtcgggcct
gagctgaagctgcaccaatgcggtcttcccaagaagatggcgctcgagctcttcaagccc
ttcatctatcaccgcctcgagcagaccggtcactgcaccaccatcaagcaggccaaagag
atggtcgagatgcaggagccaatcgtctgggacatccttgaagaggtcatcaaggatcac
ccggtactcctcaaccgcgctccaacccttcaccgtctcggcatccaggccttcgagccc
gtgctcgtcgaaggtaaggcgatcaagatccatccgctcgtctgcaccgccttcaacgcg
gacttcgacggcgaccagatggccgttcacatcccgctctcgcctgaggctcagatcgaa
gccagcgttctcatgcttgcttcgcacaacatcttgtccccagcctctgggcaaccgatc
acagtcccgacgcaggacctcgtcctcggcctctactacctcaccaaggcgaaggttaac
gccaagggtgaaggccgcgtcttcgccaacatcgaagaggtcttcatggccctcgaagcg
aagcaggtcgagaccctcaccccgatccgtctgcgctacaccggccctgtcctcgacatg
accaccgcgtacgacgatcaggacctcacccacaccgagccggtcgagttcaacaaccag
ttcatctcgaccaccgtcggccgcgccatcctcaacgatgcgctccccgagggcatgccc
tacgtcaacggccttctcaagaagaagggcattggccagctcatcaactactgctacctg
aacctcggcctcgaagttacggtcaagaccctcgatcgcgtcaaggatcttggattcacc
tatgccacccgctccggcctctcggtcgggctggacgacatggtcatccccgactccaag
tacaccctcgtcggcgaagccgaaaagaccgttctcgccatgcagcagcagtacctcgac
ggagccatcaccaacggtgagcgctccaacaaggtcatccagatgtggtcgggagtcacc
gagcgcgtcgccgacgagatgttcaacaacatgaagcgtgccgacaaggaaggagccatg
aacccgatctacatcatggccgactccggtgctcgtggatccaaacagcagatccgccag
ctctccggcatgcgtggtttgatggccaagccctccggcgagatcatcgaaacccccatc
acggcgaacttccgcgaaggtctcaccgtgctgcagtacttcatctcgacccacggcgca
cgtaagggcctcgccgataccgcactcaagaccgctgactcgggttatctcacccgccgt
ctggtcgacgttgcgcaggatgtcatcatctcgcacaacgactgcggcactgtcgaaggc
atctacgtgacgccgatcatcgaggcgggcgagaccatcgagcctctgcgcgaccgcatc
atcggccgcgtctcactcgagaagttgaaggacttcgaaggcaagaccatcgtcgacgtc
aaccaggagatcgatgaagatctcgccagcgccgttcaggccgcgggtatcgagcgcgtc
aagatccgctcggtcctcacctgcgagtccaagcgcggcgtctgcatcctctgctacggc
cgtaacctcggctccggcaagatggtggagatgggcgaagccgtcggcgtcatcgcggcg
cagtccatcggcgagcccggcactcagctcaccatgcgtaccttccacatcggcggtacg
gcatcgcgcgtatccgacgcctcgcacctcgagtccaagaacatcggcaccgtgcgcttc
atcaacctcgtcaccgttcgctccaaggacggcggcctggtcgccttcaaccgcaacggc
tccctcgccatcgtcgacgagaagggccgcgagaaggagcgttacgctgtcgtctacggt
gccaagctcaaggtcgaagagggccagcaggtcgtccagggtacgcgcctcggcgagtgg
gacccctacaccttctccctcctcaccgagatcgccggaaccgttcagttcaaggacctc
caggaaggcctcacgctcaacgaagaagtcgacgaagtcaccggcctcagccggcttgtc
gtcaccgactcctccgacgagaagcgtcagcccgccatcatcatcaagtccgctcaaggc
aacaagcgttacctcatgccttcacgcgctcacctcatggtggccgacggcgacgagatc
ttccccggcgacatccttgccaagatcccacgcgaaaccacgcgtaccaaggacatcacc
ggcggtctcccacgcgtcgtcgaactcttcgaggcccgcaagccacgcgacccggcaatc
atcagcaagatcgatggtgtcgttcgcttcggcgaagtctccaaggggcagcgtaaggtc
tacgtcaccgcggacaacggtcaggaagaggagtacagcgttccccgcggtacttacgtc
aacgtgcaggaaggcgaacgcctccgtgccggtgacgctctgatcgacggtccccgcaac
ccgcacgacattctggaagttctcggcgagcgcgcacttcagcagtacctcgtcaacgag
atccaggaagtctaccggctccagggcgtcaccatctccgacaagcacatcgaaaccatc
gttcgtcagatgcttcgctgggtcaagatcgaagaagttggcgacaccaccttcctcgtc
gatcagcagaccgaccgcttccgcttcaacgccgaaaaccagcgcgtgttgatgtccggc
ggcaagcctgccatcggccgttcgctcctcctcggcatcaccaaggcgtcgctctcgacc
gacagcttcatctcggccgccagcttccaggagaccacccgcgtcctcacggaagccagc
atcaacggctccatcgacacgctccgtggcctcaaggaaaacgtcatcgtaggccgcctc
atccccgccggcaccggcatggagtactaccgcaacgtccagctctccccagagctagag
gaagcggcagcccaggtccagcaggaagtggcatccgccatcgaagccgaagagcgcgaa
ctagaacagatgcgcatggaaggcgaacaagaagaactagccgccgagtga
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integrated database retrieval system
