Tunturiibacter empetritectus: RBB75_16165
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Entry
RBB75_16165 CDS
T10212
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
temp Tunturiibacter empetritectus
Pathway
temp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RBB75_16165 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
temp01007
]
RBB75_16165 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
temp03016
]
RBB75_16165 (serS)
Enzymes [BR:
temp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RBB75_16165 (serS)
Amino acid related enzymes [BR:
temp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RBB75_16165 (serS)
Transfer RNA biogenesis [BR:
temp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RBB75_16165 (serS)
Prokaryotic type
RBB75_16165 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TMF_TATA_bd
ODAD1_CC
Syntaxin
KASH_CCD
MIF4G_like_2
CENPH
LRIM1_dimer
FapA
Motif
Other DBs
NCBI-ProteinID:
XCB25958
UniProt:
A0AAU7ZAE8
LinkDB
All DBs
Position
complement(3906044..3907372)
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AA seq
442 aa
AA seq
DB search
MIDLAFVRANLALVEEKLRNREIDPAIALRNFVEIDRERREAITRVETLKAQRNKLTEEI
AKLRREGADTTAQTEQTRTLKSEAESLESAAAASDERLKEILQALPNLSQDGVPIGRSAD
DNRQEKVWGEKTTFDFMAKPHWDLGETLGILDFGRAAKISGSRFVVQFGQGARLERALAN
FMIDLHTGEHGYTEVLPPYMVNSKSLFGTGQLPKFDEDLFHCDDKGTYQPGVYQENDHWL
IPTAEVPVTNLFREETLDESQLPISFCAYTPCFRSEAGSYGKDVRGMIRQHQFQKVELVK
FVRPEDSNSEHERLTRHAETVLERLGLPYRRMLLCTGDMGFSAAKTYDLEVWLPGQQLYR
EISSCSNFETFQARRANIRYRPAKAKKSEFLHTLNGSGLAVGRTYLAILENYQQSDGTVR
VPDVLIPYMNGDTVIGKQQGWS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccttgcatttgtgcgggctaatttggccctagtagaagaaaagttgcgtaac
cgggagatagatcccgcaattgcactccgtaactttgttgaaatcgaccgcgagcgccgc
gaggctatcactcgagtggagacgctgaaggcccagcgaaacaagctaacggaagagatt
gcgaagctcagacgtgaaggcgcagatacgaccgcacagaccgaacagactcgcaccctg
aagtctgaagcggagtcgctcgagtccgccgcagcggcctccgacgagcgtttgaaagag
atactgcaggccctacccaacttatcccaggatggcgttcccattgggcgatccgccgac
gacaaccgacaagagaaggtctggggcgagaaaacaaccttcgattttatggcgaaacct
cactgggatctaggcgaaacgctaggcattctcgactttggccgcgctgccaaaatctca
ggctcccgttttgttgtccaattcggccagggagcccggcttgaacgcgccctcgccaac
tttatgatcgaccttcatacaggcgagcacggctatacagaagtcctgccaccgtacatg
gtcaactctaagtcgctctttggcacgggccaactgcccaagtttgacgaagatctcttc
cattgcgacgacaaaggtacctaccagcccggggtttaccaggagaacgatcattggctc
attcccaccgctgaggtcccggtcacgaacctatttcgcgaagagacgctcgacgaatcg
cagcttccaatatctttctgcgcctataccccttgtttccgctccgaagcaggctcctac
ggcaaagatgttcgtggcatgatccgccagcatcagttccagaaggtcgagttggtgaag
ttcgtacgtccagaagactccaactccgagcacgaacgactcacacgccatgctgagaca
gtgcttgagcgcctcggcctcccttaccggcgaatgctgctctgcacaggcgatatgggc
ttttctgctgctaagacctatgacctcgaggtgtggttgcccggccagcaactctatcgc
gagatatcctcgtgctcgaacttcgagaccttccaagcccgcagggcgaatattcgctac
cgcccggccaaagcaaagaagagcgagttccttcataccctcaacggcagcggactcgct
gtaggacgcacctaccttgcgattctggagaactatcagcaatcggacggcaccgtaaga
gtcccggacgtgttgataccctatatgaacggcgatacggtgatcggcaagcagcaaggc
tggagctaa
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