Tunturiibacter empetritectus: RBB75_17285
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Entry
RBB75_17285 CDS
T10212
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
temp Tunturiibacter empetritectus
Pathway
temp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBB75_17285 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
temp03400
]
RBB75_17285 (uvrB)
DNA repair and recombination proteins [BR:
temp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBB75_17285 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBB75_17285 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
Kinesin
AAA_22
SWI2_SNF2
AAA_16
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XCB26167
UniProt:
A0AAU7ZCU6
LinkDB
All DBs
Position
complement(4180803..4182791)
Genome browser
AA seq
662 aa
AA seq
DB search
MDFQLSTTYKPQGDQPRAIAELISGIHAGEKDQVLLGVTGSGKTFTMAKVIEELQRPALI
LAHNKTLAAQLYHEFKTFFPSNAVEYFVSYYDYYQPEAYIPAGDLFIEKESTINEELDKL
RLAATRSLFERRDAIIVSSVSCIYGLGSPEAYYGMLMLLEKGQKIKREDITRRLVEILYE
RNDVDFRRGTFRVRGDIIEVYPTYDENAYRIELFGDEIDSLSQIDPLFGTVRQKYSRLPI
YPKSHYVVQPERKTTAVNSILEEMEWWEKELENQGRLVESQRIHQRTRFDLEMIKSVGFC
HGIENYSRHFSSRLPGEPPPTLLDYFPQDYLLFIDESHVTVPQLHGMWHGDRSRKQNLVD
YGFRLPSAMDNRPLRFEEFESRTGQIIYVSATPGAYELTKSAGVVVEQIIRPTGLIDPQV
EIRPIKGQIDDLLAEIRDRTAKNQRVLVTTLTKRMSEDLASYYTEVGVRCRYMHSEIETL
ERIKLLRDLRKGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSQGSLIQTIGRAA
RHVEGRAILYADKMTDSMQRAINETDRRREKQVAYNEENGITPASIIRPIEMGLAGILKA
DYADLTDEAEGMPDFSTQQELDVYIGKLESDMREAAKKFEFEKAAKLRDTVKELRTKEFL
FS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacttccagctctcgaccacctacaagcctcagggcgatcagcctcgcgccatcgct
gagctcatctccggcatccacgccggcgaaaaagatcaagtcctcctcggcgtcaccggc
tccggaaaaaccttcaccatggccaaggtcatcgaagagctgcaacgccccgccctcatc
ctcgcgcacaacaaaaccctcgccgcccagctctaccacgagttcaaaaccttcttcccc
tcgaacgccgtcgagtacttcgtctcctactacgactactaccaacccgaagcctacatc
cccgccggcgatctctttattgaaaaggagtcaaccatcaatgaagaattagataaactc
cgcctcgccgccacccgcagcctcttcgagcggcgcgacgccatcatcgtctcctccgtc
tcctgcatctacggcctcggctcgcccgaagcctactacggcatgttgatgctccttgaa
aaaggtcagaagatcaagcgcgaagacatcacccgccgcctcgtcgagatcctctacgag
cgcaacgatgtagacttccgccgcggcaccttccgcgtccgcggcgacatcatcgaggtc
taccccacctacgacgaaaacgcctaccgtatagagctcttcggcgacgagatcgacagc
ctgtcgcaaatagaccctctcttcggcaccgtcaggcaaaaatactcccgcctccccatc
tatcccaagtcccactacgtcgtccaacccgaacgcaagaccaccgccgtcaactctatc
ctcgaagagatggagtggtgggagaaagaactcgaaaaccagggccgcttagtcgagtcc
caacgcatccaccagcgcacccgcttcgacctcgagatgatcaagtccgttggcttctgc
cacggcatcgaaaactactcccgccacttctcctcgcgtctccccggcgaaccgccgccc
acgctcctcgactacttcccccaggactacctcctcttcatcgacgagtcccacgtcacc
gtcccgcaactccacggcatgtggcacggcgatcgcagccgcaaacaaaacctcgtcgac
tatggcttccgactcccctccgcaatggacaaccgccccctccgctttgaagagttcgag
tcccgcaccggccagatcatctacgtctccgccacccccggcgcctacgagctgacaaaa
tccgcaggcgtagtcgttgaacagatcattcgtcccacgggcctgatcgatcctcaagtc
gagattcgccccatcaaaggccagatcgacgacctactcgccgagatccgcgaccgcacc
gcgaagaaccaacgcgtcctcgtcaccaccctcaccaagcgcatgtccgaagacctcgcc
agctactacaccgaagtcggcgtccgctgccgctacatgcactccgagatcgaaaccctc
gaacgcatcaagctcctccgcgacctccgcaaaggcgagtacgacgtcctcatcggcatc
aacctactccgcgaaggactcgacctaccggaggtctcgttggtagcaatcctggacgcc
gacaaggaaggcttcctccgctcccagggatcactcatccagaccatcggccgcgctgcc
cgtcacgtcgaaggccgggcaattctttatgcggataagatgaccgactccatgcagcgc
gccatcaacgagaccgaccgccgccgcgaaaaacaagtcgcctacaacgaagaaaacggc
atcactcccgctagcatcatccgccccatcgagatgggcctagccggcatcctcaaagcc
gactacgccgacctcaccgacgaagccgaaggcatgcccgacttctccacccagcaggaa
ctagacgtctacatcggcaaactagaatccgacatgcgcgaagccgccaaaaaattcgaa
ttcgaaaaagccgccaaactccgcgacacggtaaaagaactccgcaccaaagaattcctc
ttcagctaa
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