Tunturiibacter empetritectus: RBB75_17685
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Entry
RBB75_17685 CDS
T10212
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
temp Tunturiibacter empetritectus
Pathway
temp03030
DNA replication
temp03430
Mismatch repair
temp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBB75_17685 (dnaE)
03430 Mismatch repair
RBB75_17685 (dnaE)
03440 Homologous recombination
RBB75_17685 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
temp03032
]
RBB75_17685 (dnaE)
03400 DNA repair and recombination proteins [BR:
temp03400
]
RBB75_17685 (dnaE)
Enzymes [BR:
temp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBB75_17685 (dnaE)
DNA replication proteins [BR:
temp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBB75_17685 (dnaE)
DNA repair and recombination proteins [BR:
temp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBB75_17685 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RE_TaqI
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XCB26241
UniProt:
A0AAU7ZBF3
LinkDB
All DBs
Position
4274944..4278492
Genome browser
AA seq
1182 aa
AA seq
DB search
MAAEFTHLHLHTDYSLLDGACDVDKLAGHLSKIGQTAAAMTDHGNIYGAVHFFEAMQKKG
IKPILGCELYICKNDDHRAAPEGDKYNHLLVLAENQEGYRNLVRLTSEAALHGFYRKPRV
SKDFLAKHSEGLIGFSGCLAGEVNQFLMEDKYEEAKRIAGFYQDLFGKGNYFLEIQDHGL
APDKGVCDALFKMERELDIPLIATNDSHYVASDDSRAHEILLCVQTAGSMNDPKRFKFDT
QEFYIKSAEEMLRTFSQNPEVCTRTMQFIERCNVKMLKVDNPFPDFNVPEGETLDTYFEQ
VCRKGLEMRLETAVAHLRSRGLLKKTIPEYHERLDRELNIIKQMKFPGYFMIVWDFIKYA
REQRIPVGPGRGSAAGSLVAYVMQITDIDPLQNELLFERFLNPERVSMPDIDIDFCMNRR
GEVIEYVNRKYGRDQVAQIITFNTMAAKAAIKDVGRALDMPYGEVDRIAKMIPTTIGITI
DQALKDSPSLAGAYEGDPKIKELIDAALRLEGLVRGAGVHAAGVVIAPKPLTELVPVTRA
KNDDIVTAYDMKAVEKMGLLKMDFLGLTTLTVIDDALKLIKSTTGTDVDMAMVPLDDAKT
YEQVYHRALTSGVFQFESGGMRDVLRRYKPNTVEDLTALNALYRPGPIQGGMIDDFIERK
WGRRAVSYELPELEMILRETLGVIVYQEQVMQISNVLAGYSLGDSDLLRRAMGKKDPAEM
AKQRDRFMSGAAANKHPKDTAGKIFDLMAQFAGYGFNKSHSAAYALLAYHTAWLKTHYPV
EFMAALLTSETSKPENVVKYISECREMNISVVPPNVQVSDANFTPIETPGGAAIGFGLAA
IKNVGHNAIESIIAARTALQAAGKKGFSSLWEFCEKVDLRLLNKRVLESLIKAGAMDVFG
GRAALCAALDKAMERAQKSQRDEAAGQHGLFGIFDADIHSPSSHNGEEALPSVAEWDEHT
RLQNEKEVLGFFVSGHPMDKYREKLRNMKVVDTATACEMKPEPQVFRRGRSEEPQNEISI
AGVITGLKVAKSKRSGEMYAQASLEDTVGKIELIAFPQSYEKLAEKLKIDVPVVVRGVLR
GEEDSAPKLAVSSIQALEDVKIKLPDSLRIKVPLHNPDAALLEKLHAILVGAPGKGKLLL
DLEEPGEFCAVLEPHNCLVAADRLFIDQVEELVGRGGVRIID
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagtttactcaccttcatcttcatactgactactcactcctcgatggcgcc
tgcgacgtagataaacttgccgggcatttgagcaagattggccagacagcggctgcgatg
accgaccacggaaatatctatggcgcggtgcactttttcgaagcgatgcagaagaaggga
atcaagccgattctcgggtgcgaactttacatctgcaagaacgacgatcatcgtgccgcg
ccggagggagataagtataaccacctgttggtgctggcagagaatcaggagggctatcgc
aatctggttcggctgacgagcgaggcggcgctgcatgggttctatcgaaagccgcgcgtg
tcgaaggattttcttgcgaaacattcggagggcttgattggattctcgggctgtcttgcg
ggtgaggtgaatcagtttttgatggaggacaagtacgaggaggcgaagcgtattgctggc
ttttatcaggatcttttcggtaaaggcaactattttctcgagattcaggaccatggactg
gcgccggataagggcgtctgcgatgcgttgttcaagatggagcgcgagcttgatattcct
ctgatcgcgaccaatgatagccactatgtcgcttcggatgattcgcgagcgcatgagatt
ctactctgcgtgcagacggccggcagcatgaacgacccgaagcgattcaagttcgatacg
caggagttttacatcaagagcgcggaggagatgctgcggactttctcgcagaatcccgag
gtctgcacacggacaatgcagtttattgaacgatgcaacgtaaagatgttgaaggtggac
aatccgtttccggatttcaacgtgcctgagggagagacgcttgatacctactttgagcag
gtgtgccgcaagggcctggagatgcgcctcgaaacggctgttgcccatctgcgttcccgg
ggattgttgaaaaaaacgattcctgagtatcacgagcggctggaccgcgagctgaacatc
atcaaacagatgaagtttcctggttatttcatgattgtctgggactttatcaagtatgcg
cgcgagcaaaggattccagtgggaccggggcgtggatcggctgcgggttcattggtggct
tacgtgatgcagattacggatatcgatccgctgcagaatgaactgttgtttgagcgtttt
ctgaatccggagcgcgtgtcgatgccggatatcgatatcgacttctgcatgaaccggcgt
ggtgaggtgattgagtacgtcaaccgaaagtatgggcgggatcaggttgcgcagattatt
acgttcaacacgatggcggccaaggctgcgatcaaggacgtgggacgtgcgctggatatg
ccgtatggcgaggtcgaccggatcgcgaagatgattccgactacgattgggatcacgatc
gatcaggctttgaaggattcgccttcgttggcaggggcgtatgagggcgatccgaagatt
aaggagttgatcgatgcggcgctgcggctggagggacttgttcgcggcgcgggcgtgcat
gcggcgggtgtcgtgattgcgccgaagccgctgacggagttggttccggtgacgcgtgcg
aagaacgacgatatcgtcacagcatatgacatgaaggctgtcgagaagatggggcttctg
aagatggacttcctcggactgacgacgctgacggtgattgatgatgcgttgaagctgatc
aagtcgacgacgggtacggatgtcgatatggcgatggttccgctggatgatgcgaagacg
tatgagcaggtgtatcaccgggcgctgacctcgggtgtgtttcagtttgagtcgggcggg
atgcgagatgtgttgcggcgatataagccgaacacggttgaggacctgactgctttgaac
gcgctgtatcgtccggggccgattcagggtggcatgatcgacgacttcatcgagcgcaag
tggggacggcgggcggtgagttatgagctgcctgaactggagatgattcttcgcgagacg
ctgggggtcattgtgtaccaggagcaggtgatgcagatctcaaacgtgctggcgggctac
tcactgggcgattcggacctgctgcggcgggcgatggggaagaaggatcccgcggagatg
gcgaagcagcgcgatcgcttcatgagtggcgcggcggcgaataaacatccgaaggatacg
gcagggaagatctttgacctgatggcgcagtttgccggatatggcttcaataagtcacat
tcggctgcgtatgcgctgctggcctatcacacggcgtggttgaagacgcattatccggtg
gagtttatggcggctctgctcacgagcgaaacgtcgaagccggagaacgtggtgaagtac
atctcggagtgccgcgagatgaatatctcggtggtgccgccgaatgtgcaggtttcggat
gcgaactttactccgatcgaaacacccggtggggctgcgatcggatttgggttggcagcg
atcaaaaatgttgggcataacgcgattgagtcgatcattgcggcgcggacggcgctgcag
gctgcgggaaagaaggggttctccagcttgtgggagttctgcgagaaagttgacctgcgg
ctgctgaataagcgtgtgctggagtctctgatcaaagctggcgcgatggatgtgtttggc
ggccgggcggcgttgtgcgctgctctggataaggcgatggagcgggcacagaagtctcaa
cgcgatgaggcggctgggcagcatggcttgtttggaatcttcgatgcggatattcattct
ccttcttcgcacaatggtgaggaggcactgccaagcgttgcggagtgggacgaacacaca
cgtttgcagaatgaaaaagaggtgctgggattctttgtgtccgggcatccgatggataag
tatcgcgagaagcttcggaacatgaaggttgtcgatacagcgacggcctgcgagatgaag
cctgagccgcaggtatttcgacgaggacgaagtgaagagccgcagaatgagatctctatt
gcgggcgtgattacaggcctgaaggtcgcgaagtcgaagcgctcgggggagatgtatgcg
caggcttcgcttgaggatacggtgggtaagatcgagttgatcgcgtttccgcaatcgtac
gagaagcttgcggagaagttaaagatcgatgtgcccgtggtggttcggggcgtgttgcgc
ggcgaagaggattcggcgccgaagcttgccgtttcgagcattcaggcgctggaggatgta
aagatcaagctgccggattcgttgcggatcaaggttcccctgcataatcctgatgcggcg
ctgcttgagaagctgcatgccatcctggttggagctcctggcaaaggaaagctgctgcta
gatctcgaagagccgggggagttttgtgcggtgcttgaaccccacaactgcctggtcgcc
gcggatcggcttttcatcgatcaggtggaggaactggtgggccgcggaggggttcgcatc
atcgactag
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