Tunturiibacter empetritectus: RBB75_18315
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Entry
RBB75_18315 CDS
T10212
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
temp Tunturiibacter empetritectus
Pathway
temp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
temp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBB75_18315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
temp03400
]
RBB75_18315
Enzymes [BR:
temp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RBB75_18315
DNA repair and recombination proteins [BR:
temp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBB75_18315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
XCB26359
UniProt:
A0AAU7ZBP8
LinkDB
All DBs
Position
4414272..4415861
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AA seq
529 aa
AA seq
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MKRILLEPDFNAWREAAREALHLGYLPEELELQDSTVPSTLDLTLELADGPTGPPITAPH
TSKSFLESAECAAVHRDPLRWNLLYRILYRLQANRNLLKISVDPDVAELERLESQVRRDL
HKMHAFVRFRMVLEPDDLNGRPIVVDESLPTDPNPHHLVLAVPTPFGLNHTALPHCEPDP
HATPTPSQPDTCEHFIAWYQPDHRILPLAAPFFVERFGIMRWTILTPDASVSWDPTGKQL
AFAPGLPRESAPAEDELEDLWRSYYASIYNPARINPEMMRSEMPVRYWKNLPEISLLPDL
LIKSQSRVSDMVTRQQQQPSAQPFVPEDHSLPTLRAALPACKGCELYQHATQVVPGVGAA
RAKLILVGEQPGDQEDLQGQPFVGPAGNILDRVMAELDIDRSKVYVTNAVKHFKFIQRGK
FRLHQNPRMSEISACRPWLLAEIDSIQPNVVLCLGASASKSLLGGTFALMRDHGKILNTP
YANQVIATIHPSAVLRARDKESGEQLFQILRDDLALAWHTAQKPALTPV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaattctccttgaacccgacttcaacgcatggcgtgaagcagcacgcgaagcc
ctgcacctcggctatctccccgaggaactcgagctgcaagactcgactgtcccctccacg
ctggaccttaccctcgaattggccgacggtcccaccggccctccaattacggcgccgcat
acctccaaatcctttctcgaatccgcagagtgcgccgccgtccatcgcgatcccctgcgc
tggaatctcctatatcgcatcctctatcgcctgcaagccaatcgcaatctccttaaaatc
tccgtcgaccccgacgtcgccgaactcgaacgtctcgaatcgcaggtccgccgcgacctt
cataagatgcacgccttcgtccgctttcgcatggtgctcgaaccggacgatctcaacggc
cgccccatcgtcgtcgacgaatccctccccactgaccccaatccgcaccaccttgtactc
gccgtgcctacgccctttggcctcaaccacaccgcacttccccactgcgaacctgatcct
cacgccaccccaacgccctcacagcccgacacctgcgaacacttcatcgcctggtaccag
cccgaccaccgcatccttccactcgcagcgcctttcttcgtcgaacgcttcggcatcatg
cgctggactatccttacgcccgacgcctccgtctcgtgggatcctaccggcaaacaactc
gccttcgccccgggcctgcctcgcgagtctgcccccgccgaagacgagctcgaagatctc
tggcgctcgtactacgccagcatctacaaccccgcgcgcatcaacccggagatgatgcgc
agcgagatgcccgtccgctactggaagaatcttcccgagatctcgcttctacccgacctc
ctcatcaaatctcaaagccgagtctccgacatggttacacgtcaacagcaacagccctct
gcgcaacccttcgtcccggaagaccactcgctgcccacccttcgcgccgcactccccgca
tgtaagggctgcgaactgtaccagcacgccacccaagtggttcccggggtcggagcagcc
cgtgccaaactcatcctcgtcggcgaacaacccggcgatcaggaagatctccagggtcag
cccttcgtcggtcctgccggcaacatacttgaccgcgtcatggccgaactcgacatcgac
cgcagcaaagtctacgtcaccaacgctgtcaaacacttcaaattcatccagcgcggcaag
ttccgccttcaccagaatcctcgcatgtcggagatcagcgcctgccgcccctggctcctc
gccgagatcgactctatccaacccaacgtcgttctatgtctcggcgcctctgcctccaag
tccctgctgggcggcaccttcgccctcatgcgcgaccacgggaagatcctcaacaccccc
tatgccaatcaagtcatcgccaccatccaccccagcgccgtccttcgcgcccgcgacaaa
gagtccggcgaacagctctttcaaatcctccgcgacgacctggccctggcctggcacacc
gcgcaaaagccagccttgacaccggtatga
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