Tenacibaculum todarodis: LPB136_00900
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Entry
LPB136_00900 CDS
T04588
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ten
Tenacibaculum todarodis
Pathway
ten03030
DNA replication
ten03430
Mismatch repair
ten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB136_00900
03430 Mismatch repair
LPB136_00900
03440 Homologous recombination
LPB136_00900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ten03032
]
LPB136_00900
03400 DNA repair and recombination proteins [BR:
ten03400
]
LPB136_00900
Enzymes [BR:
ten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB136_00900
DNA replication proteins [BR:
ten03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB136_00900
DNA repair and recombination proteins [BR:
ten03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB136_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
pAdhesive_17
Motif
Other DBs
NCBI-ProteinID:
APG64013
UniProt:
A0A1L3JG18
LinkDB
All DBs
Position
186829..187656
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AA seq
275 aa
AA seq
DB search
MELNLTKPIVFFDLETTGVSIATDRIVEIAILKVHPNGNKESKTWLVNPEIEIPQGAIDI
HGITNEKVVTEPTFKELAAEVSKMIEGCDLAGFNSNRFDIPLLAEELMRAGIDFDMNNRK
AVDVQVIFHKKEQRTLSAGYQFYCGRELEGAHGAEADTNATYEILLAQLDKYDDIENSID
ALSEFSTHGKRADFAGFILMNEEDQEIFSFGKYKGRTVEEVLKENPGYNNWIQNADFPLY
TKKVLRQIKERMSAPKDTMSDEDKLNALQQKFNLR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaacttaacaaaaccaatcgtatttttcgatttagaaactacaggagtaagt
attgcaaccgatagaattgtagaaattgcaattttaaaagtgcatccaaacggaaataaa
gaaagtaaaacgtggttggtaaatccagaaattgaaattccgcaaggagccatcgatatt
catggaattacaaacgaaaaagtagttaccgaaccaacttttaaagaattagctgcagaa
gttagcaaaatgattgaaggttgtgatttagcgggtttcaattctaatagattcgatatt
cctttgttagcagaagaattaatgcgagcaggaatcgattttgatatgaataacagaaaa
gcggttgatgttcaagtaatctttcacaaaaaagaacaacgaacattaagtgctggttat
caattttactgcggaagagaattggaaggagcgcacggagcagaagcagataccaacgca
acctatgaaattttgttagcgcaattagataaatacgacgatatagaaaatagtattgat
gcgttaagtgaattttcaactcacggaaaaagagctgattttgctggttttattttaatg
aatgaagaagatcaagaaattttttctttcggaaagtacaaaggaagaacagtagaagag
gtgttaaaagaaaacccaggttataacaattggattcagaatgcagattttccattgtac
acaaaaaaggtattaagacaaataaaagaaagaatgtctgcgccaaaagataccatgagt
gatgaggataagttgaacgcgttacagcaaaaatttaatttgaggtaa
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