Tenacibaculum todarodis: LPB136_01270
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Entry
LPB136_01270 CDS
T04588
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ten
Tenacibaculum todarodis
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ten03016
]
LPB136_01270
Enzymes [BR:
ten01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LPB136_01270
Transfer RNA biogenesis [BR:
ten03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LPB136_01270
Prokaryotic type
LPB136_01270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Lactamase_B
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
APG64080
UniProt:
A0A1L3JG31
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All DBs
Position
complement(276264..277178)
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AA seq
304 aa
AA seq
DB search
MSLKLTILGCHSATPRINAHPTSQHLEINNSHFIIDCGEGTQRQMRKYKVGFSKINHIFI
SHLHGDHFFGLIGLISTFGILGREKDLHVYGPKGIKEVTVLQLKLSKSWTSYQLIFHELT
STESELIFEDDKVSVTTIPLTHRVYTNGFLFKEKPKPRGLNIDVVKTYKEIETCDYNNIK
AGRDFTLSTGEVLPNSMLTSAPEKPKSYAYCSDTMYKPDIIPIIKNVDLLYHEATFLNDR
EDLCEKTKHSTAKQAGIIARDAEVGKLIVGHYSSRYPNIVDFKTEAEAVFPTVENAEAGK
SFTV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaaactcaccattttaggttgccattctgcaacacctcgtattaatgcgcat
ccaacatcgcaacatttagaaattaacaacagtcattttattattgattgtggtgaaggt
acacaacgccaaatgcgaaaatataaagttggtttttctaaaattaatcatatttttatt
tctcatttacacggagatcatttctttgggctaattggcttaattagcactttcggaatt
cttggtagagaaaaagatttacacgtttatggcccaaaaggcattaaagaagtaacggtt
ttacagttaaaactatcaaaatcttggacaagttatcagttaatttttcatgagttaact
tctacagaaagcgaacttatttttgaagatgataaagtgagcgtaacaacaatcccttta
acgcatagagtttatacaaatggatttctttttaaagaaaaaccaaaacccagaggttta
aatattgatgtagttaaaacctacaaagaaattgaaacttgcgattacaataatataaaa
gctggtagagattttaccttatctacaggtgaagttttaccaaattccatgttaacttcg
gcaccagaaaagccaaagagttatgcttattgtagcgacactatgtataagcctgatatt
attccaattattaaaaatgtagatttattataccacgaagctacttttttaaatgaccgt
gaagatttgtgcgaaaaaacaaaacactcaaccgcaaaacaagcaggtattattgctaga
gatgctgaagttggtaaattaattgttgggcattattctagtagatacccaaatattgta
gattttaaaaccgaagcggaagcagtttttccaactgtagaaaatgcagaagctggtaaa
agttttactgtttaa
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