Tenacibaculum todarodis: LPB136_03175
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Entry
LPB136_03175 CDS
T04588
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ten
Tenacibaculum todarodis
Pathway
ten03420
Nucleotide excision repair
ten03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB136_03175
03430 Mismatch repair
LPB136_03175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ten03400
]
LPB136_03175
Enzymes [BR:
ten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB136_03175
DNA repair and recombination proteins [BR:
ten03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB136_03175
MMR (mismatch excision repair)
Other MMR factors
LPB136_03175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
ResIII
AAA_11
nSTAND3
MrkDrd
ARM_TT21_C
Motif
Other DBs
NCBI-ProteinID:
APG66389
UniProt:
A0A1L3JMS7
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All DBs
Position
693751..696081
Genome browser
AA seq
776 aa
AA seq
DB search
MNSYLDQLNEPQRAAVLQKDGPMIIIAGAGSGKTRVLTYRIAHLMKQGVDPFNILSLTFT
NKAAREMKERIASVVGYSEAKSLWMGTFHSVFARILRSEADKLGYPTNFTIYDTQDSVRL
ISAIIKELQLDKERYKAKQILSRISSFKNSLITVRAYFNNPELIEADLHASRPKVGDIYK
EYVDRCFKAGAMDFDDLLLRTNELLARFPEVLAKYQDRFRYIMVDEYQDTNHSQYIVVRA
LADRFQNICVVGDDSQSIYSFRGANIQNILSFQKDYPDVKTFKLEQNYRSTKNIVNAANS
VIARNKTRLDKEVWTSNVDGELIKVMRTISDGEEGRFVANSIFENKMNLQLKNDQFAVLY
RTNAQSRAMEDALRKKDIKYKIYGGISFYQRKEIKDLLSYLRVLINPNDEEALKRIINYP
ARGIGATTLDRLTIAANHYKKSIFEIIQHIDKVDVNINGGTKNKLQNFINMMLRFQIDSQ
KMNAFEIADLVVKQTQLVKDLQKDGTPEGVSKVENVQELLNGIKDFITDKIEEGEDASLT
SFLEDVALATDFDSEKADEEPRVSLMSIHQSKGLEYGYVYIVGLEENLFPSAMSMNTRSE
LEEERRLFYVALTRAEKVAYLSYAQTRYRWGKLTDAEPSRFLEEIDDKFLEYIAPKRQET
SKSSFLDASLFEDAPKKIRFQKPIQKKRKEFLDKKNKGALIPPKTKMKKVSEATSNDINL
FDGDITVGNIVEHNRFGRGEVLALEGKGPNKKAEIMFGTAGRKKLLLQFAKLKVIG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagttatttagatcaacttaacgaaccacaaagagcagcagttttacaaaaagac
ggcccaatgattattattgcgggtgcaggttctggtaaaacaagagtattaacctacaga
attgcacatttaatgaagcaaggcgtagatccgtttaatattttgtcgcttacatttacc
aataaagcggctcgtgaaatgaaggaaagaattgcttccgttgttggttatagcgaagca
aaaagtctttggatgggaacttttcactcagtttttgcacgtattttgcgttcagaagca
gataaattagggtatccaactaactttacaatttacgatacacaagattctgtaaggtta
atttcggcaatcattaaagaactacaacttgacaaagaaagatacaaagcaaagcaaatt
ttaagtcgaatttcatcctttaaaaacagtctaattacagtaagagcgtactttaataat
ccagaattaattgaagcagatttgcacgcaagtcgtccaaaagtcggagatatttacaaa
gaatatgtagatcgatgttttaaagctggtgcaatggattttgatgatttattgttgaga
accaatgagttattggcgcgttttccggaggttttagcaaaataccaagaccgttttagg
tacataatggtagatgagtatcaagatacaaaccactcacaatacattgtggttcgtgct
ttggcagatagatttcagaatatttgtgtggtaggagacgattctcagagtatttatagc
ttccgtggagcaaatattcaaaatatattaagttttcagaaggattatcccgatgtaaaa
acgtttaaacttgagcaaaattatcgctcaactaaaaacatagtaaacgcagcaaactct
gtaattgcaagaaataaaacgcgattagataaggaagtttggacctctaatgtagatgga
gagcttataaaagtaatgcgtacaatttctgatggtgaagaaggacgttttgtagcaaat
tcaatctttgaaaacaagatgaacttgcaattaaagaacgaccaatttgcagttttatac
agaacaaatgcacaatccagagcaatggaagacgctttgcgaaaaaaagatattaagtat
aaaatttacggaggaatctcattttatcaacgtaaagaaataaaagatttactctcatac
cttagagttttaatcaatccaaatgatgaggaagctttaaaacgaatcattaattatcct
gctcgtggtattggcgcaactacgttagaccgattaacaattgcggcaaatcattataaa
aaatcaatttttgaaattatacaacatatagataaagttgatgtaaatataaatggcgga
acaaaaaataagcttcagaattttataaatatgatgttgcgtttccaaatagattcgcaa
aaaatgaacgcttttgaaattgcagatttagttgtaaaacaaacgcaattagtaaaagat
ttacaaaaagatggcacaccagaaggtgtaagtaaggttgaaaacgttcaagaactttta
aacggaataaaagattttattacagataaaattgaagaaggtgaagacgcttcattaact
tcattcttagaagatgttgctttggcaaccgacttcgattcagaaaaagcagacgaagag
ccaagagtttctttaatgagtattcatcaatctaaagggttggaatatggttatgtgtat
atagttggtttagaagagaatttatttccttcagcaatgagtatgaacacacgtagcgag
ttagaagaagaacgcagattattttatgtagccttaaccagagcagaaaaagttgcctat
ttaagttatgcacaaacgcgttaccgttggggaaaattaactgatgccgagccaagtaga
ttcttagaagaaatagacgataaatttttagaatacattgcaccaaagagacaagaaact
tctaaaagtagctttttagacgcaagtttgtttgaagatgctccaaagaaaattagattt
caaaaaccaattcagaagaaaagaaaagagtttttagataagaaaaacaaaggagcttta
attccgccaaagacgaaaatgaaaaaagtatctgaagcaacttcaaatgatattaacctt
tttgatggcgatataaccgttggtaatattgtagaacacaatagatttggcagaggagaa
gtactagctttggaaggtaaaggtccaaataaaaaagcagaaattatgtttggaaccgca
ggaagaaagaaattattattacaatttgcaaaactaaaagtgattgggtaa
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