Tenacibaculum todarodis: LPB136_03965
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Entry
LPB136_03965 CDS
T04588
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ten
Tenacibaculum todarodis
Pathway
ten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB136_03965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ten03400
]
LPB136_03965
Enzymes [BR:
ten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB136_03965
DNA repair and recombination proteins [BR:
ten03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB136_03965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
WHD_PriA_bact
ResIII
Zn_ribbon_PriA
HTH_65
Helicase_C
PriA_C
nSTAND3
ATPase_2
AAA_30
nSTAND6
AAA_19
DnaB_C
Nrap_D6
NTPase_1
ALIX_LYPXL_bnd
TsaE
Cript
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
APG66398
UniProt:
A0A1L3JMN9
LinkDB
All DBs
Position
complement(862531..864954)
Genome browser
AA seq
807 aa
AA seq
DB search
MLPIPLHKTFTYSVTEAEANFLEKGMRVAVSFGKTKMYTALVVEIHTTAPTLYEAKDIHQ
ILDEKPIVNEQQLKHWQWISNYYMCPLGDVFRAALPSAFLLESETIIYKNEAFTDESILT
DTEFLIFEALQHQSQLTIHQVVDILDKKKVMPIINELIKKSAIYIKEEIYEVYKPKLIKY
VRMHPNYSNDADLENLLNELSRAKKQRDAVLSFFQLSSSKKPIKAKDLETNANVSASILK
ALVDKNIFEFYHLKTDRINYKGDTNSLKELNEFQQKALEEIETSFQEKDVVLLHGITSSG
KTEVYTKLIQNVLDSGKQVLFLLPEIALTTQIITRLQHYFGNQISVFHSKYSMNERVEVW
NNVLENKPKAQIILGARSSVFLPFNNLGLIVVDEEHETSYKQFEPSPRYNARDSAIVLAN
IHKGKILLGSATPALESYFNATQNKYGLVELNRRFGNVQLPKIELIDIKDKHKKKLMKGH
FSDRMLQLITEALEQKEQVILFQNRRGFSPVVECNTCGNSPQCPNCDVSLTYHKYRNELR
CHYCHYQRAMPNSCGACGSNTLDTKGFGTEQIELELKELFPDNSIGRMDLDTTRGKFGYQ
KIIGAFEAHEIDILVGTQMLSKGLDFENVSLVGILNADSMLNFPDFRAHERAYQLMVQVS
GRAGRSKKQGNVAIQTFNPHHQILQQVSTTNYAEMYKEQLNDRWQYHYPPYYRLIKITLK
HKDFIRVDNGINWLFKSLQNVFGEHVLGPTAPAVARVRNQYIKNLVIKIPPKQSLAKTKE
QIAKIKNTFEAVKDFRPIRFILDVDAY
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atattaccaattccgttacacaaaacgtttacgtattccgtaaccgaagcagaagctaat
ttcttagaaaaaggaatgcgtgttgcggtttcttttggtaaaacaaaaatgtacactgcg
ttggttgtagaaattcatacaacagcgccaacgttatatgaagcaaaagatattcatcaa
attttagatgaaaaacctattgtaaatgagcaacaattaaaacattggcaatggatttct
aactattatatgtgtccgttaggcgatgtttttcgtgctgctttgccatctgcatttttg
ttagaaagcgaaactatcatttataaaaatgaagcgtttacagacgaaagtattttaaca
gatacagagtttttaatttttgaagccttacaacatcaatctcagcttacaattcatcaa
gttgtagatattttagataagaaaaaagtaatgccaattattaatgaactcattaagaaa
tcggcaatttatattaaagaagaaatttacgaggtttacaaaccaaagttgattaagtat
gttcgcatgcatccaaattatagcaatgatgcagatttggaaaacttactaaacgaactt
tccagagctaaaaaacagcgagatgctgtattgagcttttttcaactttcctcttcaaaa
aagccaataaaagcgaaagatttagaaacaaatgccaatgtttctgcgtccattttaaaa
gctttggttgataaaaatatctttgaattttatcatttaaaaaccgatagaataaattac
aaaggagacaccaattccttaaaagaactgaatgaatttcagcaaaaagcattagaagaa
attgaaacttcttttcaagaaaaagatgttgttttattgcatggaattacgtcttctggt
aaaacagaagtctacacaaagctgattcagaatgttttagatagcggaaaacaagtgttg
tttttattgccagaaatagctttaacaacgcaaattattaccagattacaacattatttc
ggaaatcagatttctgttttccattcaaaatactcaatgaatgaaagggtagaagtgtgg
aataatgttttggaaaacaaaccgaaagcgcaaataattttaggcgcgcgttcttcagtt
ttcttaccgtttaacaatttaggtttaattgtggtggatgaagaacacgaaacttcttac
aaacaatttgaaccttcaccaagatacaacgcaagagattctgccattgttttggcaaat
attcataaaggaaaaatcttattaggttccgcaactccagctttagaaagctactttaac
gcaacacaaaacaaatatggtttggtggagttaaatagacgttttggaaatgtgcaatta
cctaaaattgagttgattgacattaaggataagcacaaaaagaaattgatgaaagggcat
ttttctgatagaatgctacaattaataacggaagctttagaacaaaaagagcaagttatt
ttgtttcagaatagaagaggattttcgccagttgtagagtgtaacacttgtgggaattcg
cctcaatgtccaaattgcgatgtttctttaacctatcataaatacagaaacgaattgcgt
tgccattattgccattaccaacgcgcaatgccaaacagttgtggtgcttgtggaagcaat
acattagatactaaaggttttggaacagaacaaattgagttggaattgaaggaattattt
ccggataattccatcggaagaatggatttagatacaactagaggaaaatttggatatcaa
aagataattggtgcttttgaagcgcatgaaattgatattttagtaggaacacaaatgctt
tctaaaggattggattttgaaaatgtgtcgcttgtaggaattttaaacgcagattctatg
ctaaattttccagattttagagcgcatgaacgcgcctatcaattaatggtacaagtttcg
ggtagagcaggacgaagcaaaaaacaaggtaatgtggcaattcagacttttaatccgcat
catcaaatattgcaacaagtttctaccacaaattatgcagaaatgtataaagagcagtta
aatgatagatggcaatatcattatccaccttattacaggttgattaaaattaccttaaaa
cacaaggattttattcgagttgataacggaattaattggctctttaaatctttacaaaac
gttttcggagaacatgttttaggaccaactgcgcctgctgtagcaagagttcgaaatcaa
tatattaagaatttggttattaaaattccgccaaaacaatcgttagcaaaaaccaaagaa
caaattgctaaaattaaaaacacctttgaagcggtaaaagattttagaccaattcgtttt
attttagatgtggatgcttattag
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