Tenacibaculum todarodis: LPB136_05000
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Entry
LPB136_05000 CDS
T04588
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ten
Tenacibaculum todarodis
Pathway
ten03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB136_05000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ten03400
]
LPB136_05000
Enzymes [BR:
ten01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LPB136_05000
DNA repair and recombination proteins [BR:
ten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPB136_05000
Prokaryotic type
LPB136_05000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APG64757
UniProt:
A0A1L3JI16
LinkDB
All DBs
Position
complement(1119233..1119895)
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AA seq
220 aa
AA seq
DB search
MQIKIASSWNNILQTEFEKPYFKKLINFLKDEYSSKTCFPKEEDIFAAFNFCSFEAVKVV
IIGQDPYHGINQANGLCFSVQDGIKHPPSLVNIFKEIATDLGSEYPQSGNLEKWAKQGVL
LLNATLTVRESEAGSHQKKGWETFTDTVIAKISEEKENVVFLLWGKFAEKKGVSINTDKH
TVFTAPHPSPLGAWRGWFGSKHFSKTNAFLKNIQKEIIQW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataaaaattgctagtagctggaataatattttacaaactgagtttgaaaaacca
tattttaagaagttaattaactttttaaaggatgagtacagtagcaaaacctgttttcca
aaagaagaagacatttttgcggcatttaatttttgttcttttgaagctgtaaaagtcgta
attattggtcaagatccgtatcatggaataaaccaagcaaacggattgtgtttttctgtg
caagatggaattaaacatccgccatctttagtaaatatttttaaagaaattgctacagat
ttaggaagtgaatatccgcaaagcggaaatttagaaaaatgggctaaacaaggtgttttg
ttattaaatgcaactttaacagtacgtgaatctgaagcaggaagtcatcaaaaaaaaggg
tgggaaacgtttacagatacagtaattgctaaaatttctgaagaaaaagaaaatgtagtc
ttcttactttggggaaagtttgctgagaaaaaaggagtttcaattaatactgataaacat
actgtttttacagcaccacatccatcacctttaggtgcttggagaggttggtttggttct
aaacacttttcaaaaacaaatgcttttttaaaaaatattcaaaaagagattatacaatgg
tag
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