Tenacibaculum todarodis: LPB136_05005
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Entry
LPB136_05005 CDS
T04588
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
ten
Tenacibaculum todarodis
Pathway
ten03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPB136_05005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ten03400
]
LPB136_05005
DNA repair and recombination proteins [BR:
ten03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LPB136_05005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_21
MSSS
Rad17
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APG66416
UniProt:
A0A1L3JMN5
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Position
1119911..1122130
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AA seq
739 aa
AA seq
DB search
MVFKYTTLSISSKTLQDLEFTTVLQQVEEFCISGLGKESVLNIQPITSKKKLFFELDLVN
EYLASFENENRLPNHGFDNILESIKRLAIENSFLEPEAFLKIAATSEVVNEQKKFLKKFK
DYYPTLFLLSESIEFTTEISNAIKKIITADGIIADNASPVLKQIRKDIGQVRGKISESFT
RALSKSISSGYLDDIKESVVDNQRVLAVLAMYRRKVAGSLLGASKSGNIVYIAPQATLQH
GRELQNLLYEEKQEIVKILRTLSEEIRPFVGLLEAYVAYLTHLDVVGAKAKYARSINALL
PKITKEKQLFFKNAFHPILWQKNEEKNINTVPQTIQLNEKQQIIVISGPNAGGKSITLKT
IGLLQVMLQSGLLIPVHERSVTTIFNTVLTDIGDNQSIENQLSTYSYRLKNMRNFLRKCN
DNTLFLIDEFGTGSDPELGGALAEIFLEEFHQKEAYGIITTHYANLKVLANELDNVTNAN
MQFDERTLEPLFKLFIGQAGSSFTFEVAQKNGIPYSLINRAKKRVETEKIRLDKTISKLQ
KERNKLQKRSDSLEKQQTKGREHIDSLQEKEQKIQDKLSGFQELYDTNQKMLSLGRKTNE
LLHKYFQTNNKKELSAEFLKWVAAEKVKHTKKNPPKKKTKTEKKQEKVAIQKKTAIVKQI
EKEVLEKVVEVRKEKKIEAAKIAKAKADYIYKIGDRVRLIDSNSVGTIDKIEKKNIFINY
GVFTTKAKTNQLELVEKRK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atcgttttcaaatatacaacattgagcatctcatcaaaaacattacaagatttagaattt
acaacggttttacaacaagttgaagaattctgtatttctggtttaggtaaagaaagtgtt
ttaaacattcagccaataactagtaaaaagaaattattttttgagttggatttggtaaac
gaatatctagcctcttttgaaaacgaaaaccgacttccaaatcatggttttgataatatt
ttagaaagtataaaaagactagctattgaaaatagctttttagagcctgaggctttttta
aaaattgctgctacttcagaagttgtaaatgaacaaaaaaagttcctaaagaaatttaaa
gactactaccctacactattcttattaagtgaatctattgaatttactacagaaatttct
aacgcaataaaaaaaataattactgcagatggaattattgcagacaatgcttcacccgtt
ttaaaacaaattagaaaagatattgggcaagttcgtggtaaaatttctgagagttttaca
cgtgctttaagcaaaagtatttctagcggttatttagatgacattaaagaatctgtagtt
gataatcagcgagttttagcagtgttagccatgtatcgtagaaaagtagctggtagttta
ttgggcgcttcaaaatctggtaacatcgtttatattgctccacaagcaaccttgcaacat
ggacgtgaattgcagaatttactatatgaagaaaagcaagaaattgtaaaaatcctacga
actttatcagaagaaattagaccttttgtaggtcttttagaagcatatgtagcgtattta
acgcacttagatgttgttggtgcaaaagcaaaatatgcgagaagtattaatgcattattg
cccaaaataacgaaagaaaaacaactgttttttaagaacgcttttcatcctattttatgg
caaaagaatgaggagaaaaatataaatacagttccacaaaccattcagcttaacgaaaaa
caacaaattattgttatttcgggtccaaatgctggtggaaaaagtattacgttaaaaacc
attggtttactacaagtcatgttacaaagcggcttattaatccctgttcatgaacgtagc
gttactacaattttcaatacagttttaactgacatcggagataatcaatcaattgaaaat
caattaagtacttatagttatcgtttaaagaacatgcgtaattttttacgtaaatgtaat
gacaacacactctttttaattgatgaatttggtacaggttctgatccggaattaggtgga
gctttggcagaaatttttttagaagaatttcatcaaaaggaagcttacggaattataaca
acgcattatgcaaatttaaaagtgttagctaacgaattagataatgttaccaacgcaaac
atgcagtttgatgaacgtacattagaacctttatttaagttatttattggacaagcaggt
agttcttttacgtttgaagttgctcaaaaaaatggtattccttatagtttaatcaaccga
gcaaaaaaacgtgttgagacagaaaaaatacgtttagataaaaccatatctaaattacaa
aaagagcgtaataaattacaaaaaagatctgatagcttagagaaacaacaaacaaagggt
agagaacatattgatagtttacaggagaaagaacagaagattcaagataaactttctggt
ttccaagaattatatgatacaaaccagaaaatgctttctttaggtagaaaaacgaatgaa
ttattgcataaatactttcaaactaacaacaaaaaagagctttctgctgagtttttaaaa
tgggttgctgcagaaaaagtaaaacatacaaagaagaatccgcccaaaaagaaaacgaaa
accgaaaaaaaacaagaaaaagttgccattcaaaagaaaacagctattgtaaaacaaatt
gaaaaagaggttttagaaaaggttgtagaagttagaaaagaaaagaaaattgaagccgca
aaaattgccaaagctaaagctgattatatttacaaaattggagatcgagttcgtttaatt
gacagtaattctgttggaactattgataaaattgaaaagaaaaacatttttataaattac
ggtgtttttaccactaaagcaaaaacaaatcagttggaattggttgaaaaaagaaagtaa
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