Tenacibaculum todarodis: LPB136_06685
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Entry
LPB136_06685 CDS
T04588
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ten
Tenacibaculum todarodis
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ten03016
]
LPB136_06685
Enzymes [BR:
ten01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LPB136_06685
Transfer RNA biogenesis [BR:
ten03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB136_06685
Prokaryotic type
LPB136_06685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
APG65061
UniProt:
A0A1L3JIU8
LinkDB
All DBs
Position
complement(1481867..1482649)
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AA seq
260 aa
AA seq
DB search
MNYKHTYLVTIQYLGFRFHGWQKQPNLKTGHLFLDKTLKFIYKDIRLKSLGVGRTDARVS
ANYFAFQLFIDVEVDFNQFMTDFNHNAPSDMRALKIENIDKKFNVINHPKVKEYRYYFSF
GEKNHPFAAPFLNRFREQLDIELMKKGAELFVGFHDFTNYCTKPSAETKVNREIVFCSIE
KNTEITASFFPKESFVLIVKGSGFLRNQIRLIMGALHDLGKGEFDLEFIKQSLEPNNTID
FLKNIAPASGLHLHNIEFEK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaattataagcatacgtatttagtaaccatccaatatttagggtttagatttcatggt
tggcaaaaacaacctaatttaaaaacaggacatctttttttagataaaacactaaagttt
atttataaagatattcggcttaaaagccttggtgttggtagaactgatgcaagagtttca
gcaaattattttgcctttcagttatttattgatgtagaagttgattttaatcagtttatg
actgattttaatcataatgctccaagtgatatgcgagctttaaagattgaaaacatagac
aaaaaatttaatgttatcaatcatcctaaagttaaagaatatcgatattacttttctttt
ggtgaaaagaatcatccatttgcagctccgtttttaaatcgatttagagagcaattggat
attgaactaatgaaaaaaggtgcagagttgtttgttggatttcatgattttacaaactat
tgtaccaaaccttctgctgaaactaaagtgaatagagaaattgttttttgtagtattgaa
aagaatactgaaataacagcttcgttttttcctaaagagagttttgttttaattgttaaa
ggaagtggttttttaagaaatcagattcgtttaattatgggagctttacacgatttaggc
aaaggtgagtttgatttagagtttattaaacaaagtcttgaacctaataatactattgac
tttttaaaaaatattgcgccagcatctggtttgcatttacataatatcgaatttgaaaaa
taa
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