Tenacibaculum todarodis: LPB136_07120
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Entry
LPB136_07120 CDS
T04588
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ten
Tenacibaculum todarodis
Pathway
ten00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LPB136_07120
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ten01007
]
LPB136_07120
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ten03016
]
LPB136_07120
03029 Mitochondrial biogenesis [BR:
ten03029
]
LPB136_07120
Enzymes [BR:
ten01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LPB136_07120
Amino acid related enzymes [BR:
ten01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LPB136_07120
Transfer RNA biogenesis [BR:
ten03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LPB136_07120
Prokaryotic type
Other AARSs
LPB136_07120
Mitochondrial biogenesis [BR:
ten03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LPB136_07120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GatB_N
GAD
tRNA_anti-codon
GatB_Yqey
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
APG65134
UniProt:
A0A1L3JJ39
LinkDB
All DBs
Position
complement(1566420..1569752)
Genome browser
AA seq
1110 aa
AA seq
DB search
MELEQLNELIEKHDLELVIGLETHVRLNTKTKLFCSCANQEIEKPNQNICSVCTGQMGVL
PSINKEAITKAIYFGKAVESTFSNEVISWDRKHYEYPDNPKNIQITQFHNPVIPDGKVSC
YRNDGSQFTVELTQVHIEEDAAKLMHEKKVSLVDFNKAGVPLIEIVTEPCVRNIEDASIY
AQYIQRIVQNLKISEANLEKGEFKSDVSVSLRKKNDTGLNPRTEIKNLNSFKFMVDALKE
EIEKQLNYYIENNAFRPDQTTVLWDADLKQTKTMRKKEFEADYRFISEPDLPFVSIKNVV
ESIDVDVSSLPYAVESILIEGGVLPQDAKFFTADSLRSETFVAINNKVNDASFVAKTLTN
NIKPEQYKDIQNIDDLSAIFSLLKEDKVTVVLAQNAITSLLKDSKFDYTAYFKTNTISGA
QIEAAIQKVVSENEAIANDIKAGNQGKAGILVGKVIGIIGKGASGKVIREGIIRAVSNSP
LDNSQEQTAKSEQPKANSEHPKAEEELPQIPIIIKEEYRTHKISQLSEASIKEEVTLSGW
VASVRDHGELIFIDLRDSSNQVFQVRLSKETFPNLDELVKLKPESVIAVTGVVVQRNEDD
YNVGLRTGKLELETASLEILNLSKTLPFEIKRAFKSNEQVRFQYKFLDHRNDEVRKAIVN
RHKVIKLMRDILDEEEFLEIETPILTAGTDEGAREFIVPTRKQAGSFYTLPQAPQQFKQM
LMVGGFEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQIIDLNTKMFNEIVRKIY
GKKWILHPFEVITYKNAMDKYGCDRPDLRYGLQMQDITDIVKDTTFQVFSKPIEEGGIVK
CIKVSAKEQGNKRMSKGQIENLTAIAQQNGLGGLAYIIVNENDLQSPIIKFLGEEIAANI
IKVTNAQVGDIVFFSAADYATANKALDAVRQEMGRLLKLINPKELRPAWVVDFPMFEKTD
EGRWTFTHNPFSMPAIYDLEKHMTGEGEEIGTIIAQQYDLILNGYEIGGGSVRAHKSEIL
EATYKNMGYDKEEMMKSVGTMYKAFQYGAPPHGGIAWGVDRLMMILEKKASIREVMAFPK
TGSSEDLLFNAPSILSDKKVEEMNVKIIRK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggaattggaacaattaaatgagcttatagaaaagcacgatttagagttagtaattggt
ttagaaacacacgttcgattaaatacaaaaacaaagttattctgttcttgtgcaaatcaa
gaaatagaaaaaccaaatcagaatatttgttctgtttgtactgggcaaatgggtgtttta
ccatctataaataaagaagcaattacaaaagctatttattttggaaaggctgtagagtct
actttttctaatgaagtaatctcgtgggatcgtaaacattatgaatatcctgataaccct
aaaaatattcaaattacacagtttcataatcctgtaattccagacggaaaagtttcttgt
tatagaaatgatgggagtcaatttacagtagaattaacgcaagttcatattgaggaagat
gcagcaaaattgatgcacgaaaagaaagtttctttggttgattttaataaagcgggtgtt
ccgttaattgaaattgttacggaaccttgtgttcgtaatattgaagacgcatctatatac
gcacaatacattcagcgtattgttcagaatttaaaaatatcggaagcaaacctagaaaaa
ggagagtttaaatcggatgtttctgtatccttaagaaagaaaaatgatacaggtttaaat
ccgcgtacagaaatcaaaaacttaaattcttttaagtttatggttgatgctttaaaggaa
gaaattgaaaaacaactaaattactatatagaaaataacgcgtttagaccagatcaaaca
acagttttatgggatgctgatttaaagcaaaccaaaacaatgcgtaaaaaggaatttgaa
gcagattatcgttttatttctgagccagatttaccttttgtaagcataaaaaatgttgta
gaaagtatagatgttgatgtaagttctttgccttatgcagttgaatcaattttgattgaa
ggtggtgttttaccacaagatgctaagttttttacagcagattcgttgcgttcagaaacc
tttgtagctattaataataaggtgaatgatgcttcttttgtagcaaaaacgttaaccaat
aatattaagccagaacaatataaggatattcagaatattgacgatttaagcgctattttc
tctttattaaaagaagataaagtaacggttgtgttggctcaaaatgctattacatcttta
ttaaaagattcaaaatttgactatacagcatattttaaaacaaatacaatttcaggagct
caaattgaagctgcaattcagaaggtagtttcagaaaatgaagcaattgcaaacgatatt
aaagcaggaaaccaaggtaaagcaggtattcttgttggtaaagtaattggaattataggc
aaaggagcttccggaaaagtaattagagagggaattataagagctgttagcaattcgcct
ttagataatagccaagagcaaacagccaaaagcgaacagccaaaagcaaatagcgaacat
ccaaaagcagaagaggagttaccacaaattcctattattataaaagaagaatacagaaca
cataaaatttctcaattatccgaagcttcaatcaaagaagaagtaacattatcgggttgg
gttgcaagtgttagagatcatggagaattaatttttatcgatttaagagattcaagtaat
caagtttttcaagtacgtttaagtaaagaaacgtttcctaatttagacgaattagtaaag
ctgaaaccagaatcggtaattgctgtaactggtgttgtagtgcaaagaaatgaagacgat
tataatgtaggtttaagaactggtaaattagaattagaaacggctagtttagagatttta
aacctttctaaaacgttgcctttcgaaattaaaagagcatttaaaagtaatgagcaggtt
cgttttcaatataaatttttagatcatagaaatgatgaagttcgtaaagcaattgtaaac
cgtcataaggttatcaagctaatgcgagatattttagacgaagaggaatttttagaaatt
gaaacgccaattttaactgctggtacagatgaaggcgcaagagaatttattgttccaaca
agaaaacaagcaggttctttttatacgcttccacaagcgccacaacaatttaaacaaatg
ttaatggtgggtggatttgaaaaatacttccaaattgcacgttgttttagagatgaagat
tctcgcggagacagacaaccagagtttacacaattagatattgaaatggcgtacgcaagt
atgcaacagattatcgatttaaacaccaaaatgtttaatgaaattgtacgtaaaatttat
ggtaaaaaatggattttacatccgtttgaagtcataacatataaaaatgcaatggataaa
tatggttgcgatagaccagatttacgttatggattgcaaatgcaagacattacagacatt
gtaaaagatacaacgttccaagtctttagtaaacctattgaagaaggcggaattgtaaaa
tgtattaaagtttctgcaaaagagcaaggaaacaaaagaatgtctaaaggtcaaattgaa
aacctaacagctattgcacaacaaaatggtttaggcggtttggcgtatattattgtaaat
gaaaacgatttacaatcgccaattattaaatttttaggcgaagaaattgcagcaaatatt
ataaaagtaaccaatgcgcaagttggagatattgtgtttttctctgcggcagattatgca
acagcaaacaaagcattagacgctgttcgtcaagaaatggggcgcttgttaaaattgatt
aatcctaaagagttaaggcctgcttgggttgtagattttccaatgtttgaaaaaacagac
gaaggaagatggacatttacacacaatccattttctatgccagcaatctacgatttagaa
aagcacatgactggagaaggtgaggaaataggaaccattattgctcaacaatatgattta
atcttaaacggttatgaaattggtggaggttctgttcgtgcacacaaatcagaaatttta
gaagcaacctataaaaacatgggttatgataaagaagaaatgatgaaaagtgtaggaacc
atgtacaaagcatttcaatatggagcgccaccacatggaggaattgcttggggagttgac
cgtttaatgatgattttagaaaagaaagcttctattagagaagtaatggcttttcctaaa
acaggttcgtctgaagatttattatttaacgcaccatcaattttatcagataaaaaggtt
gaagaaatgaatgtgaagataattaggaaatag
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