Tenacibaculum todarodis: LPB136_07280
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Entry
LPB136_07280 CDS
T04588
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ten
Tenacibaculum todarodis
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ten03016
]
LPB136_07280
Enzymes [BR:
ten01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LPB136_07280
Transfer RNA biogenesis [BR:
ten03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB136_07280
Prokaryotic type
LPB136_07280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Acid_PPase
OmdA
Motif
Other DBs
NCBI-ProteinID:
APG65162
UniProt:
A0A1L3JJ88
LinkDB
All DBs
Position
complement(1607612..1608352)
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AA seq
246 aa
AA seq
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MRYFLELAYNGKNYHGWQVQPDVISVQEEINKALSTVLQTTVNVVGAGRTDTGVHASQMF
AHFDIDREIEENYVFKFNSILPKDIVIYKLILVEDEAHARFDALSRSYQYNIWLGRNPFT
LENSWQIHSQKFNVSLMNEAAKILFEYEDFESFSKVKTEVYTFNCTITEAIFKQNGNEII
FYISANRFLRNMVRAIVGTLLEVGQGKISIEDFRKIIESKNRGNAGLSVPAKGLFLTKVA
YNYIKN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
ttgagatactttttagaactagcatataacggaaaaaattatcacggttggcaagtacaa
ccagacgtaatttctgtacaagaagaaattaataaagcactaagcacagtcttgcaaact
actgttaacgttgtaggagcaggaagaaccgatactggtgttcatgcttctcagatgttt
gcacattttgatattgatagagaaatagaagaaaattatgtgtttaagtttaattcaatt
ttaccaaaagatatagtaatttataaactgattttggtagaagatgaagctcatgcgcgt
tttgatgcactaagtagaagttatcaatacaacatttggttaggtagaaacccatttacg
ttagagaattcttggcaaattcattcacaaaaatttaatgtaagtttgatgaatgaagcc
gcaaaaattctttttgaatatgaagattttgaaagcttttcaaaagtaaaaacagaagta
tatacttttaactgtactataactgaagcaatatttaaacaaaacggaaacgaaattatc
ttttatatatctgcaaacagatttttaagaaatatggttagagccattgttggtacatta
ttagaagtaggacaaggaaaaatttctattgaagattttagaaaaattatagaaagtaag
aatagaggtaatgcaggtttatcagttcctgcaaaaggattatttttaacaaaagtagca
tataattatattaaaaattaa
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