Tenacibaculum todarodis: LPB136_07530
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Entry
LPB136_07530 CDS
T04588
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ten
Tenacibaculum todarodis
Pathway
ten03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB136_07530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ten03019
]
LPB136_07530
03110 Chaperones and folding catalysts [BR:
ten03110
]
LPB136_07530
03029 Mitochondrial biogenesis [BR:
ten03029
]
LPB136_07530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ten04147
]
LPB136_07530
Enzymes [BR:
ten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LPB136_07530
Messenger RNA biogenesis [BR:
ten03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LPB136_07530
Chaperones and folding catalysts [BR:
ten03110
]
Heat shock proteins
HSP60 / Chaperonin
LPB136_07530
Mitochondrial biogenesis [BR:
ten03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LPB136_07530
Exosome [BR:
ten04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LPB136_07530
Exosomal proteins of other body fluids (saliva and urine)
LPB136_07530
Exosomal proteins of breast cancer cells
LPB136_07530
Exosomal proteins of colorectal cancer cells
LPB136_07530
Exosomal proteins of bladder cancer cells
LPB136_07530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
APG65204
UniProt:
A0A1L3JJB5
LinkDB
All DBs
Position
1677203..1678834
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPTVTKDGVSVAKEVE
LEDELENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVTAIVTDLEKQAKKVGNSSDKIQQVASISANNDSVIGDLIATAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDADKMIADLDNPYVLLFDKKISNLQEILPILEPV
SQSGRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFSLENATLDLLGTAESITVDKDNTTIVNGAGNATAIKARVNQIKSQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKAVLTKITTDNLDETTGVQIVNKAIEAPLRTIVENAGGEGSVVINKVLEGKKDFGYDA
KSETYVNMLDAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEDAPAGMPPMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcaagagacggtttaaaacgtggagttgat
gctttagcaaacgcagtaaaagtaacattaggcccaaaaggaagaaacgtaattatttct
aaatctttcggtgctccaacagttactaaagatggtgtttctgttgcaaaagaagttgag
ttagaagatgagttagaaaacatgggagcgcaaatggttaaagaagttgcttctaaaact
aacgatttagctggagacggtacaactactgcaactgtacttgcgcaagcaattgtaaaa
gaaggtttaaagaatgtagccgcaggcgcaaatccaatggatttaaaacgcggaattgat
aaagctgtaactgcaattgttacagatttagaaaagcaagctaagaaagttggtaattct
tcagataaaattcaacaagtagcatctatttctgctaataacgattctgttattggagat
ttaattgcaactgcctttggtaaagttggtaaagaaggagttattactgtagaagaagca
aaaggaacagatacgtatgtagatgttgttgaaggtatgcaattcgatagaggttattta
tctccttattttgttacagatgcagacaaaatgattgcagatttagacaatccttatgtg
ttattattcgataaaaagatttctaacttacaagaaattcttcctattttagaaccagtt
tctcaatcaggaagacctttattaattattgctgaagatgttgatggacaagcattagct
actttagttgtaaataaattaagaggtggattaaaaattgctgctgtaaaagctccaggt
tttggagacagaagaaaagcaatgttagaagacatcgcaatattaactggaggaaccgta
atttctgaagaaagaggattttcattagaaaacgcaactttagatttattaggaactgca
gaatcaataacagtagacaaagacaatactacaattgtaaatggtgctggaaacgctaca
gcaattaaagcgagagttaatcaaattaaatctcaaatagaaaccacaacatctgactac
gataaagaaaaactacaagaacgtttggctaagttagctggtggtgttgctgtactttat
gttggtgctgcttctgaagtagaaatgaaagaaaagaaagacagagttgatgacgcttta
cacgcaacaagagctgctgtagaggaaggtattgttgctggtggtggtgttgctttagtt
agagcaaaagccgttttaactaaaattacaactgataatttagacgaaactacaggtgta
caaattgtaaacaaagcaattgaagctcctttgagaactatcgtagaaaacgctggtgga
gaaggctctgtagttattaataaagttttagaaggtaaaaaagactttggttacgatgca
aaatcagaaacatacgtaaatatgttagatgcaggaatcattgaccctaaaaaagtaacg
cgtgttgctttagaaaatgcagcttctgttgcaggaatgattcttacaaccgaatgtgct
ttaatcgatattaaagaagatgctcctgccggaatgcctccaatgggtggtggaatgcca
ggaatgatgtag
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