Tenacibaculum todarodis: LPB136_07660
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Entry
LPB136_07660 CDS
T04588
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
ten
Tenacibaculum todarodis
Pathway
ten02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LPB136_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ten03021
]
LPB136_07660
Transcription machinery [BR:
ten03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LPB136_07660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-ProteinID:
APG65229
UniProt:
A0A1L3JJE6
LinkDB
All DBs
Position
1703502..1704365
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYAFLEQENERPPSPEEIAKKLDMTVNDVKESMKNSGRHV
SMDAPLIEGEDSNLYDVLNSGESPNPDKSLLHESLRIEINRALETLTPREADVVKLYFGL
GEHQPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSRILMTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaagattaccaagcaggttactaatagagaaaccgcgtctttagataaa
tatttacaagaaataggaaaggtagatttaattactgccgatgaagaagtagaattagca
caaagaattaaagctggtgatcaaagagcattagaaaaattaacaaaagcgaatttacgt
tttgtggtttctgttgcaaaacaataccaaaaccaaggattaacattaccagatttaatt
aatgaaggtaacttaggtttaattaaagcagcaaaacgttttgatgaaactcgtggattt
aaatttatctcatacgccgtttggtggattcgtcaatctatcttacaagccttagcagaa
caatcaagaattgtacgtttaccgttaaataaaattggttcaatcaataaaattaacaaa
atgtacgctttcttagagcaagaaaacgaaagacctccaagtccagaagaaattgctaag
aaattagacatgacagttaatgacgtaaaagaatctatgaagaattctggacgtcacgta
tctatggatgcaccattaattgaaggagaagactctaacttatatgatgtattaaactca
ggagaatctccaaatccagacaaatctttattacacgaatctttacgtattgagataaac
agagctttagagacattaactccacgtgaagcagacgtagtaaaattatactttggttta
ggtgaacaccaaccaatgacattagaagaaattggtgaaacattcgatttaactcgtgag
cgtgttcgtcaaattaaagaaaaagcaattagaagattaaaacacacttctcgtagtaga
attttaatgacttaccttgggtaa
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