Tenacibaculum todarodis: LPB136_11940
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Entry
LPB136_11940 CDS
T04588
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ten
Tenacibaculum todarodis
Pathway
ten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB136_11940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ten03400
]
LPB136_11940
DNA repair and recombination proteins [BR:
ten03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LPB136_11940
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LPB136_11940
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
APG66034
UniProt:
A0A1L3JLR9
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All DBs
Position
complement(2628063..2628785)
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AA seq
240 aa
AA seq
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MAVISTKAIVISALKYSDSSLIVKCFTEQEGLKSYLIRGVLKFKKGNLKPAYFQPLTQLK
IEATHKQKSTLHTLKDATVLHQYNTIYQDIVKQSIVLFLSEVLSSCIQEEEKNIRFFSYL
ENAILWLDTHETVSNFHLLFLLNLSHFLGFYPDVSNKHKDGFNLLEGNFTDATHEKLTIS
GDKLALFKKLLGINFDAIENVSFSKQERQVILQVIIQYFELHLDGFRTPKSLAILETVFS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaatttcaaccaaagcaattgttattagtgctctaaaatattccgattctagt
cttatcgtaaaatgttttacagaacaagaaggcttaaaatcttatttaattagaggtgtt
ttaaaatttaaaaaaggaaatttaaaacctgcatattttcaaccacttacccaattaaaa
atagaagctacacacaaacaaaaatctactttacacaccttaaaagacgctactgtttta
catcaatacaatacaatttatcaagatattgtaaagcaatctatcgttttatttctgtct
gaagttttatctagttgcattcaagaagaagaaaaaaatattcgttttttttcttattta
gaaaatgcaattttgtggttagacacacatgaaacagtttctaattttcacttattattt
ttattgaatttatcacactttttagggttctacccagatgtatctaataagcataaagat
ggctttaatttacttgaaggaaattttacggatgcaactcacgaaaaactaactatttct
ggagacaaattagcactctttaaaaagcttttaggcataaattttgatgctatagaaaac
gtgtcttttagtaaacaagaaaggcaagtaattctacaagtgataattcaatattttgaa
ctacatttggacggttttagaacaccaaaatctttagcaattttagaaacagtttttagt
taa
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