Tenacibaculum todarodis: LPB136_12155
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Entry
LPB136_12155 CDS
T04588
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ten
Tenacibaculum todarodis
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LPB136_12155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ten03019
]
LPB136_12155
03009 Ribosome biogenesis [BR:
ten03009
]
LPB136_12155
03036 Chromosome and associated proteins [BR:
ten03036
]
LPB136_12155
Enzymes [BR:
ten01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LPB136_12155
Messenger RNA biogenesis [BR:
ten03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LPB136_12155
Ribosome biogenesis [BR:
ten03009
]
Eukaryotic type
90S particles
RNase
LPB136_12155
Prokaryotic type
rRNA processing factors
LPB136_12155
Chromosome and associated proteins [BR:
ten03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LPB136_12155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Mycovirus_RNAse
Motif
Other DBs
NCBI-ProteinID:
APG66075
UniProt:
A0A1L3JLP6
LinkDB
All DBs
Position
complement(2669685..2670422)
Genome browser
AA seq
245 aa
AA seq
DB search
MNNFLRRIVKPQNKEDEDFYYEMKELLNFKPIKLSHYKKAFTHRSIKETDSKGNPINYER
LEFLGDSMLGSVIASYLYKKVPSGDEGYLTQMRSKIVSREHLNELGKDLELINFVKSNIS
NDHIGDNIHGNIFEALIGAIYLDRGYNYCNQFIYDKVIEPYVDIERLEGKITSYKGLIIE
WCQKQKKKYSFDTYEDTGNQNIKHFSVKISIDGNFVAKGRATSKKKAEEQASKRVYYAMQ
DLITG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaataacttccttcgtagaatagtaaaacctcaaaacaaagaagatgaggacttttat
tatgaaatgaaagaattactcaattttaaaccaataaagctttcgcattataaaaaagca
tttacacatcgttccataaaagaaacggatagtaaaggaaatccaattaattacgaacgc
ttggagtttttaggtgattctatgttgggttctgtaattgcttcttatttatacaaaaaa
gttccgtctggagacgaaggttaccttacacaaatgcgctctaaaattgtaagtagagag
catttaaatgagttgggtaaagacctagaacttattaattttgtaaaaagcaacatttct
aacgatcatataggagataatattcacggtaatatctttgaagcattaattggcgctatt
tatttagatagaggttacaattattgcaatcaatttatttacgataaagttatagagcct
tatgtagatattgagcgtttagagggaaagattacaagttacaaagggctaattatagaa
tggtgccaaaaacaaaagaaaaagtattcttttgacacctacgaagatactggcaaccaa
aacataaagcactttagtgtaaaaattagcattgatggtaattttgtagcaaaaggaaga
gccacttctaaaaagaaagcagaagagcaagcttcaaaaagagtatactacgctatgcaa
gacttaattacgggttaa
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