Tenacibaculum todarodis: LPB136_12685
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Entry
LPB136_12685 CDS
T04588
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ten
Tenacibaculum todarodis
Pathway
ten03030
DNA replication
ten03410
Base excision repair
ten03420
Nucleotide excision repair
ten03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB136_12685
03410 Base excision repair
LPB136_12685
03420 Nucleotide excision repair
LPB136_12685
03440 Homologous recombination
LPB136_12685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ten03032
]
LPB136_12685
03400 DNA repair and recombination proteins [BR:
ten03400
]
LPB136_12685
Enzymes [BR:
ten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB136_12685
DNA replication proteins [BR:
ten03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LPB136_12685
DNA repair and recombination proteins [BR:
ten03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LPB136_12685
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB136_12685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
RNase_H_2
HHH_2
HHH_5
DUF1198
HHH
Motif
Other DBs
NCBI-ProteinID:
APG66176
UniProt:
A0A1L3JLY7
LinkDB
All DBs
Position
complement(2775394..2778222)
Genome browser
AA seq
942 aa
AA seq
DB search
MSDQKRVFLVDAFALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSVDRVEMFEAYKANRDETPEAIKLAVPYIQEILKAMHIPIMVKAGFEADDVIGT
LSKQAEKEGYKTYMVTPDKDFAQLVSENIFMYKPRFGGGYDIWGVPEVQEKFGVETPEQV
IDFLGMMGDSADNIPGLPGVGEKTAKKFLAAYGSMENLLANTADLKGKMKEKVEANGELG
LLSKKLATIMLDVPVTFHAKDFELDQPDIPKVTELFNELEFRNLLTNFLRTFNTETTTEV
KTATKVEAKKVAPKTEGQFDLFAAPGTGTVSEAEVASGFKTIENTNHFYQHIDSPLSRKL
LLKKLMQQTSVCFDTETTGLKALEVELIGIAFSFEVGKGYYVSFPEDQNETEAILEEFRP
FFTSEGIEKIGHNLKYDIKVLSNYNMPVKGKLFDTMIAHYLINPDMRHNMDMLAETYLNY
QPVSITELIGKKGKNQLSMRTVALDKQTEYAVEDADITLQLKEHFSKELSEGNLTKLYNE
VELPLVSVLTAMEIEGINLNVDFLKELSIALTDDINRLEKGIYEQAGEEFNIASPKQLGI
VLFENMKLVDKPKKTKTGQYKTGEDILSFLEKDHQIIRDIKEYRQYKKLQSTYVDALPNE
INPKTGRIHTQYMQAVAATGRLSSNNPNLQNIPIRTERGREVRKAFIPRDENHVLLAADY
SQIELRIIAALSQEETMINAFKNGEDIHASTAAKVFNVPLDEVTREQRSNAKTVNFGIIY
GVSAFGLSNQTDLSRGEAKELIDTYYETYPKLKAYMASLVDFAREHGYVETVLKRRRYLK
DINSRNAVVKNATERNAVNAPIQGSAADIIKLAMINIYNRFEKENFKSKMLLQVHDELVF
DAHKDELDIIKPIIKEEMENAFKMAVPLDVEMDLGQNWLEAH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcaaaaaagagtttttttagtggatgcttttgcattaattttccgtggatat
tatgcttttattaaaaacccaagaattaatagcaaaggattagacacttctgcaattatg
ggttttatgaactcacttttagacgtaattaaacgagaaagaccagatcatttagcagtt
tgttttgataaaggcggaagtgtagacagagtagaaatgtttgaagcctataaagctaac
agagacgaaactccagaagctataaaattggcggtaccttatatacaggaaattttaaaa
gccatgcacatacccattatggttaaagctggttttgaagcagatgatgttattggaaca
ctttctaaacaagcagaaaaagaaggttacaaaacttatatggtaacgccagataaggat
tttgcgcaattggtttcagaaaatattttcatgtacaaacctcgttttggtggtggttat
gatatttggggagttccagaagtacaagaaaaatttggcgtagaaacacctgaacaagtt
attgatttcttagggatgatgggagattctgccgataacattcctggtttacctggtgtt
ggagaaaaaacagcaaagaagtttttagccgcttatggttctatggaaaacctattagca
aacactgcagatttaaaaggaaaaatgaaagagaaagttgaagctaatggagagttaggt
ttactttctaagaaattggcaaccattatgctcgatgttcctgtaacttttcatgcaaag
gattttgaattagatcagccagatattccaaaagtaacggagctttttaacgagttagaa
ttcagaaacttattaactaactttttaagaacttttaatacagaaacaacaactgaagtt
aaaacagcaaccaaagttgaagctaaaaaagtagcaccaaaaactgaaggtcagttcgat
ttatttgcagcgccaggaacaggaactgtttctgaagccgaagttgcatcgggatttaaa
actattgaaaacaccaatcatttttaccaacatatagattcacctttatcaagaaaatta
ttgcttaaaaagctgatgcagcaaacttcggtttgttttgatacagagactacaggttta
aaagccttggaagttgaactaatcggaattgctttttcatttgaagtaggaaaaggatat
tatgtttcatttccagaagaccaaaacgaaacggaagctattttagaggaatttcgaccg
tttttcacttccgaaggaattgaaaaaatcggacataatttaaagtatgatattaaagta
ttatcgaattataatatgcctgtaaaaggtaaattattcgacactatgattgcgcattat
ttgataaatccagatatgcgacataatatggatatgttggcagaaacctatttaaattat
caacctgtttccattacagaattaattggtaaaaaaggaaaaaaccaactttctatgcga
actgttgctttagacaagcaaacagaatacgccgttgaagatgcagatattacgttgcaa
ttaaaggagcattttagcaaagaattatccgaaggaaacctaacaaaattatacaacgaa
gttgagttgccattagtttcggttttaacagccatggaaattgagggaattaacttaaat
gtagatttcttaaaagaattgtcaattgctttaacggatgatattaatcgtcttgaaaaa
ggaatttacgaacaagctggtgaagaatttaatattgcttcccctaaacaattaggtatt
gttttgtttgaaaacatgaaattggtagacaagccaaaaaagacaaaaacgggtcaatat
aaaacaggagaagatattttatcattccttgaaaaagatcatcaaattattagagatatt
aaagaatatcgtcagtataaaaaattacaaagcacgtatgttgatgcgttgccaaatgaa
ataaacccaaaaacaggaagaattcatacacaatacatgcaagctgttgctgcaactgga
cgtttgagttctaacaatcctaatttacagaacattcctattagaactgaacgcggtaga
gaggttagaaaagcctttattccaagagatgaaaaccatgttttattggctgcagattat
tctcaaattgaattgcgaattatcgctgcattaagccaagaagaaaccatgattaatgct
tttaaaaatggcgaagacattcacgcttcaaccgctgcaaaagtatttaatgttccgtta
gatgaagttactcgtgagcaacgtagcaacgcaaaaacggtaaatttcggaattatttat
ggtgtttctgctttcggattaagcaatcaaactgatttatctcgtggcgaagcaaaagaa
ctaattgacacctattacgaaacctatccgaagttaaaagcctacatggcttctttagta
gattttgcgcgtgaacatggttatgtagaaacggttttaaaaagacgtagatatttaaaa
gacatcaactcaagaaatgctgttgtaaaaaatgctacggaaagaaatgctgtaaatgca
ccaatacaaggttctgcagcagatattatcaagttagcaatgattaacatttacaatcgt
tttgagaaagaaaactttaaatctaaaatgcttttacaagtacatgacgaattggttttt
gatgcacataaagacgaattagatattataaaaccaattattaaggaagaaatggaaaat
gcttttaaaatggctgttccgttagatgttgaaatggatttaggacaaaactggttagaa
gcacattaa
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