Tauraco erythrolophus (red-crested turaco): 104369862
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Entry
104369862 CDS
T08611
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104369862 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teo03019
]
104369862 (PNLDC1)
Enzymes [BR:
teo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104369862 (PNLDC1)
Messenger RNA biogenesis [BR:
teo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104369862 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF3285
Motif
Other DBs
NCBI-GeneID:
104369862
NCBI-ProteinID:
XP_009986799
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MEFTGLYSTSPQINEPSLFDSPEERYSKARQSVQHFTVTQLGLAIFSNENSNQYVVHSYN
FFVFPSTFGVTDVEFALSASSIQFLSHYGFDYNKFLKDGIPYMNEVQEKMLSQHLLAGSC
RVSSALDRDVLKKAIDEVTCWIAAAEEEETMILQDLSGHRMFEVQLVLREALQNVWTQPL
GDKKVMVKKVSPQQRRLLENSPYDYCQKELILLSARGFTNLFQTFVKAKKPLVGHNMLMD
LMHLHDKFYKPLPESYEEFKRNIHNLFPVLIDTKTVTKSIWKKSPFPRVSNLLEVYMVLC
SNLNPKDPACPVIALASDCSRYAEKKSPHEAGYDAFLCGSVLLKSAHLLLCRSTVDAVEA
DPSFSQYLTVLAEYLNKVNFIRGGVSSINFSGEDAPCQYPPALVVHVQGWPGLNERQVYQ
EFRAHCRFDVRRLSKNQFILLSNKFKHVKLVLRDYKHHPHLPVSIYRHWRHSPRVNCLLQ
VSGIVALWSVLAFVLGGASCCSF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagtttactggcttatattcaacttccccacaaattaacgagcccagcctgtttgat
tcccccgaggagcggtactcgaaggccaggcagagtgttcagcacttcactgttactcag
cttgggctggcaatattctcaaatgaaaattcaaaccagtatgtggtgcattcatacaac
ttttttgtctttccctcaacgttcggggttacggatgtcgaatttgccctctctgcctct
agcattcagttcctgtctcattatggctttgactataataagttcctcaaagatggaatc
ccgtacatgaatgaggtacaggagaagatgcttagccagcatctcttagcgggcagctgc
agagtcagcagtgctctggacagggatgtgctgaagaaggctattgatgaagtgacctgt
tggatagctgcagcagaggaagaggagactatgattctgcaggatctgagtggccatcgg
atgtttgaagttcagctggttctgagagaggctctccaaaatgtttggacacagcctctt
ggagacaagaaggtaatggtgaaaaaagtgagtccacagcagcgtcgacttctggagaac
tctccttatgactactgccagaaagaactcatcctcctgtctgcccggggcttcaccaac
ctcttccagacatttgttaaagccaagaagcccctggtgggacacaatatgcttatggac
cttatgcaccttcatgacaagttctacaagccccttccagagagctatgaggagtttaaa
aggaacattcacaacctgtttcctgtcctcatagacaccaagactgtaacaaaatcaatc
tggaagaaaagtccgtttcctcgagtatctaatcttttggaggtgtatatggttttgtgc
agcaacctaaatcccaaagatccagcgtgccctgtgatagctcttgcaagtgactgctcg
agatatgctgagaagaaatctcctcacgaggcaggctatgatgcatttctctgtggttca
gttcttctgaagtcagctcatttgctactgtgcagatccacagttgatgcagtggaggct
gatccttctttctctcagtatctcaccgtgttagccgagtatctgaacaaagtgaatttc
atccgaggtggtgtttcaagcattaatttttctggggaagatgctccctgccagtatccc
cctgccttggttgtccatgtccaaggctggccagggctgaatgaaaggcaggtttaccaa
gagtttagagctcattgtcgctttgatgtcagacggctttcaaagaaccagttcattctg
ctctccaataaattcaagcacgtcaagcttgttctgcgagattataagcatcaccctcat
ctgccggtttccatctatcgtcactggaggcactctccgcgtgtgaactgcctgctgcaa
gtctctggtattgtggcattatggtctgtcttggcttttgtactcggaggagcttcttgc
tgttctttctaa
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integrated database retrieval system
