Tauraco erythrolophus (red-crested turaco): 104370041
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Entry
104370041 CDS
T08611
Symbol
SF3B1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104370041 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
teo03041
]
104370041 (SF3B1)
03036 Chromosome and associated proteins [BR:
teo03036
]
104370041 (SF3B1)
Spliceosome [BR:
teo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104370041 (SF3B1)
Complex B
104370041 (SF3B1)
Complex C
U2 SnRNP specific factors
104370041 (SF3B1)
Chromosome and associated proteins [BR:
teo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104370041 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
104370041
NCBI-ProteinID:
XP_009975905
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MPYDDFTEMEYLKTMLVNRIYIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDS
RFAGYVTSIAATELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQ
KIADREDEYKKHRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQ
QLAEKAKAGELKVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLR
WDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNR
WDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPV
LTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGY
KVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDI
QYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLF
NQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVE
GREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVC
KSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAAL
AEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLI
LIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQ
LVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQL
IDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAA
DLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPP
IKDLLPRLTPILKNRHEKVQENCIDLVGRIADRXADWQQSV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgatgacttcacagaaatggaataccttaagacgatgctggtaaacaggata
tatattgaagcacaaattcgagaaattcaaggaaaaaagcctgctcttgatgaagcacaa
ggagtaggccttgattccacaggatattatgatcaagaaatttatggtggcagtgacagc
aggtttgctggatatgtcacttctattgcagcaactgaattggaagatgatgatgatgac
tacccttctacaagtttgcttggccagaagaagccagggtaccatgctccagtggcattg
cttaatgacataccacagtctactgaacagtatgatccttttgcagaacaccgccctcaa
aagattgcagatcgggaagatgagtacaaaaagcacaggcggatgatgataatttcccct
gaacgtcttgatccttttgcagatggagggaagacaccagatcctaaaatgaatgccaga
acatacatggatgttatgcgtgaacagcatttaacaaaagaagagagggaaattaggcaa
caactagctgaaaaagctaaagctggagagcttaaagtcgtcaatggagctgcatctcag
ccaccttcaaaacgcaaacggcgttgggatcagacagctgatcagactcctggtgctaca
cctaaaaaattatccagttgggatcaagcagagactcctggacatacaccatctctgcga
tgggatgaaactccaggccgtgcaaagggtagcgaaactcctggtgccaccccaggatca
aaaatatgggatccgactcccagtcacacaccagcaggagctgcaacacccgggcgggat
acacccggtcatgcaacacccggccatggaggtgccacttccagtgcacgtaaaaatcgg
tgggatgaaacacctaaaacagaaagagatactccgggacatggcagtggatgggctgag
acacctcgtacggatagaggtggtgactcaattggtgagacaccaaccccaggagcaagt
aaaagaaagtcacgatgggatgaaacacctgctagccagatgggtggcagcactcctgtt
ctgacacctggcaaaacacccattggtacaccagctatgaacatggcaactcctacacca
ggtcacatcatgagcatgactcctgaacagctgcaggcttggcgttgggaaagggaaatc
gatgaaagaaacagaccgctttctgatgaagaattggatgctatgtttccggaaggatac
aaggttcttcctccaccagctggttacgtacctattcgcactccagctcgtaagcttaca
gcaactccaacacctttgggtggtatgactggattccacatgcagacagaagaccggact
atgaagagtgttaatgaccagccatctggcaatcttcccttcctaaaaccagatgatatc
caatactttgataagctgctggtcgatgttgatgaatcaactctgagtcctgaagaacag
aaggagagaaaaataatgaaactacttctgaaaataaagaatggcacacctcccatgaga
aaggctgcgttgcgacagatcactgataaagctcgggaatttggagcagggccgttgttt
aatcagatcctgcctctgctgatgtcaccaacacttgaagatcaggagcgtcacttgctt
gtcaaagtcatcgacagaattctttacaaactggatgacttggtccgaccatacgtacac
aagatccttgttgtcattgaaccactgctgattgatgaagactactatgctagagtggaa
ggcagagaaattatttcaaacttggctaaggctgctggtttggcaacaatgatctccaca
atgcgacctgatattgataatatggatgaatatgtccgaaatacaacagctcgagccttt
gctgtggttgcctctgctttgggcattccttctctgttgcccttcttgaaagctgtctgt
aaaagcaaaaaatcctggcaggcgaggcatactggcatcaagattgtgcaacagattgct
attcttatgggttgtgctatcttgcctcatctcaggagcttggttgaaattatcgaacat
ggtctggtggatgagcagcagaaagtccgcaccatcagtgctttggctattgctgccttg
gctgaggcagctactccctacggtattgagtcgtttgattctgttttgaagcctttatgg
aagggtatacgtcagcacagaggaaagggtttggctgcctttttgaaggctattggttac
ctcattccactcatggatgctgagtatgcaaactattataccagagaagtcatgctaatc
cttatcagagagttccagtctcctgatgaagagatgaaaaaaattgtgttgaaggtcgta
aagcagtgttgtggtacagatggtgttgaagcaaactacattaaaacagaaatcttgcca
ccttttttcaaacacttctggcagcacagaatggcattggacagaagaaattacagacag
ttggttgatacaactgtggagctggcaaataaagttggagcagcagaaattatttctaga
attgtggatgatctgaaagatgaggctgaacagtacagaaaaatggtcatggaaacaatt
gagaaaataatgggaaatctgggggcagcagatattgatcataaactggaagaacaactt
attgatggaatcttgtacgcctttcaggaacagaccacagaggattctgtgatgctgaat
ggttttggcacagtggttaatgctctaggcaaaagagttaaaccctacttgccacaaatc
tgtggtacagttttgtggcgtttgaacaacaaatcggctaaagttaggcagcaggctgct
gacctgatctctcgtactgcagttgtcatgaagacttgtcaagaggaaaagctgatggga
cacttgggtgttgtgttgtatgagtacctgggtgaagaatatcctgaagtactgggcagc
atacttggagctcttaaggctattgttaatgttataggcatgcacaagatgacaccaccc
atcaaagatctgctgccacggcttacacctattttgaagaacagacacgagaaagtacag
gaaaattgtattgatcttgttgggcgcattgcagacaggtaagctgactggcagcaaagt
gtttga
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integrated database retrieval system
