Tauraco erythrolophus (red-crested turaco): 104370077
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Entry
104370077 CDS
T08611
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
teo03009
]
104370077 (DDX55)
Enzymes [BR:
teo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104370077 (DDX55)
Ribosome biogenesis [BR:
teo03009
]
Eukaryotic type
Pre-60S particles
Helicases
104370077 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
SHOCT
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104370077
NCBI-ProteinID:
XP_009982259
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
SATIPLFINNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIIITPTRELAI
QIDEVLSHFTKHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGL
DLASCVKSLDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAG
LRNPVRISVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFST
CACVEYYGKALECLIKQVKIMSIHGKMKQKRNKIFTEFRKLPGGILVCTDVMARGIDIPE
VNWVLQYDPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKP
QTNVLDLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFSSLAKGFA
LLKMPKMPELRGKSFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRKEREENGGKKKFM
KNKAWSKQKAKREKKKKITAKRKSEEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEK
RLTGNQSRLNAEIVAD
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
tccgcgactattccgctcttcatcaacaacaaggacgttgccgccgaagccgtaacaggc
agtggcaaaaccttagcgtttgtaattcccatactggaaattcttctcaggcgggaggaa
aaattaaagaaaatgcaggttggagctataattatcacaccaacgagagaattagctatt
caaattgatgaggtgctgtcacatttcacaaaacacttccccaggtttagtcagattctt
ttaattggtggtaggaatcccatggaagatgttgaaaagtttaaagaacacggcgggaac
atcattgtagctacaccgggccgcttggaggatctgttcagaagaaaagcagatgggctg
gatctagcaagctgcgtgaagtctcttgatgtgttggtattggatgaagcagatagactt
ctagatatgggcttcgaagcaagtttaaatgccattctggactttctgcccaagcagaga
cggacaggtctgttctcagcaacacaaactcaagaggtggagaacctggtgagagcaggt
ctccggaatcctgtccgcatctcggtgaaagagaagggggtggcagcaagcaacacacag
aaaactccaacacgcctggagaactattacatgatctgcaaagcagatgaaaaatttaat
cagttggtgcattttcttcgacagcacaaacaggaaaaacatctagtctttttcagcacg
tgtgcctgtgtggaatactatgggaaggctttggaatgcttaattaaacaagtgaaaata
atgagcattcatgggaaaatgaaacagaagcgtaacaagattttcactgagtttcggaag
ctcccaggtggcattttagtttgcactgatgtgatggcccgtggcatagacattccagaa
gtaaactgggttttacagtatgacccacctagcagtgcgagtgcctttgtgcatcgctgt
ggtcgaacagcacggatcggcaatgtaggcagcgctctcgtgtttttgcttcccatggaa
gaatcttacattaactttctctcaatcaaccagaagtgtcccatgcaggaaatgaaaccc
cagacaaacgtgttggatcttcttccaaaactgaagtccatggccctagctgacagggcg
gtgtttgagaaagggatgaaagcatttgtgtcttatgtccaagcttatgccaaacatgaa
tgtaatctgatcttccgaataaaagacctggatttttctagccttgccaaaggttttgca
ttgttaaaaatgccaaagatgcctgaactaagaggaaaaagttttccagactttactcca
gtcactgttaatacagactccatttcatttaaggataaaaatagagaaaaacagagacaa
aagcaattagaacaacaaagaaaagagagagaagaaaacggaggaaaaaagaaattcatg
aagaacaaagcctggtcaaagcagaaagccaagagggagaagaaaaagaaaataacagct
aaaaggaagagtgaagagggctctgatattgaagatgaggatatggaagagttgctcaat
gacacgagactcttgaaaagattaaaaaaaggaaaaattagtgaagaagagtttgagaag
agactcacaggcaatcagagtagactcaacgcagaaattgttgctgactga
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