Tauraco erythrolophus (red-crested turaco): 104372642
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Entry
104372642 CDS
T08611
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo04510
Focal adhesion
teo04512
ECM-receptor interaction
teo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104372642 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104372642 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104372642 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
teo04147
]
104372642 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
teo00536
]
104372642 (COL4A4)
Exosome [BR:
teo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104372642 (COL4A4)
Glycosaminoglycan binding proteins [BR:
teo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104372642 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104372642
NCBI-ProteinID:
XP_009976689
LinkDB
All DBs
Position
Unknown
AA seq
1668 aa
AA seq
DB search
MALTKDSFERIKWLITAAWWLLIVFSAQEIDGVMSFSFYSNSDKFLLIASICQHVYADER
SKKGGYAYIDPCGGQDCSVCRCFPEKGSRGQPGELGAQGPIGSLGSTGPAGLPGQKGQRG
ENGQPGPAGEKGDKGPTGVPGFPGLDGVPGLPGTEGPRGKHGLDGCNGSRGDPGFPGENG
YVGPRGPYGNPGQKGEKGNSVYVSHFGKGPPGDRGDPGPPGMPGPRGSRGTTGPSGYPGQ
PGLPGTPGYPGLPGEQGNPGIGVDGQKGEPGDVGLPGPPGSPLLVGPPGAQLFKGEKGQK
GLPGVTGYRGPRGPKGDPGSYGPAGFPGMKGDPGEEGPPGPPGAVGTSLLPIKGPRGDPG
FPGPAGDMGAAGPIGRAGLLGRPGDDGTSLPGLPGSSGAPGPQGFQGDPGFPGTGESIPG
RPGFPGPPGLPGQPGRQGLPGLPSVICIDRGVPGEAGAKGQIGLPGRKGEKGEKGNQGLC
SCSAGPPGPRGMQGPPGTQGRKGQMGYPGRHGEKGDPGVSGAMGSPGLPGTPGSAGQHGE
KGEKGDPGRIRIKGIKGERGPTGVPGFPGQRGNDGRDGELGLPGEKGEEGHSGVPLPGDK
GFPGVPGLPGVKGQMGLPGLRLPGPPGVRGSPGDFGDTGNVGPPGPKGQKGETVCITLPY
PGNPGPPGFKGVQGPKGLKGLPGRPGPNGFDGQKGHQGRPGAGIPGPEGFRGRAGDPGDE
GERGSTVDGKDGPPGPPGIDGQKGVPGDTTYGPPGIPGNRGQPGPPGAQGARGQPGTPGF
PGAKGFRGPEGDTGAPGCPGFPGPPCDMGLPGPLGLRGVMGLPGPQGLPGFKGQRGDRGL
TGPPGIKGLKGSPGSRGPPGPPGSRGLPGLPGNKGPPGFPGQTGSKGIQGPQGFPGLPGT
QGPMGISGIKGEEGKMGPPGPSGECGDTGIKGERGPPGDSGCVNIRLERGQKGEPGFPGE
NGFRGERGEKGSTGFRGTPGFPGKNGVPGLPGDHGDIGLMGFPGPQGFPGPKGFKGMTGF
RGHPGDQGDVGLPGIPGNAGLTGPKGSKGKRGDPTPLLGTHGQKGPPGDPGLPGLCGFPG
EKGSPGIQGQPGRPGSKGDPGYPGIPGFPGATGPQGLPGEPGEKGKHGILGLPGLQGLPG
SQGRKGVPGLPGLDGLDGLKGQKGSAGAPGQSEMGPPGYSGEPGPKGDRGEPGRPGISIP
GPPGERGFPGFPGRRGPIGPPGPMGRSRDSASPGPPGDQGPPGFDGIRGQPGNPGPPGET
IFVRGDPGDIGIRGAPGNPGQRGQQGARGLPGNQGRGGPKGPMGIHGPQGPPGAIGHPGD
QGFQGIPGPRGPTGTYSIPGDPGEPGKIDDSCPAIPGLPGEAGQRGDDGSVGLPGPIGHP
GPQGRKGEEGSCGLPGQDGLPGASGPPGDQGHIGEHGYAGPQGPPGQTGIPGPPGPHIRS
ASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFNTMPF
AYCNINQVCYYASRNDKSYWLSSAAPLPMTPLSEEEIQPYISRCAVCEAPAQAVAVHSQD
QSIPPCPANWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFIECQGQRGTCQ
FFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRKKISRCQVCLKHG
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcgtttgaacggattaagtggcttatcacagctgcctggtgg
ctgctgattgttttttcagcacaagaaattgatggggtaatgtctttcagcttctacagc
aacagcgataagtttttgcttattgcttctatttgccagcatgtttatgctgatgagagg
tccaagaagggaggatatgcatatattgatccatgcggaggccaggattgttcagtttgt
cggtgctttccagaaaaaggatcaagaggtcagcctggtgagctgggagctcaaggtccg
attgggtccttgggatctacaggaccagctggtctgcccgggcaaaaaggacagagaggt
gagaatgggcagcctgggccagctggagaaaaaggtgataagggcccaactggagtccca
ggatttcctggtttggatggtgttcctggattaccaggaactgaaggacccaggggcaag
catggtttagatggctgcaatggctcaagaggagatccgggatttccaggcgaaaatggt
tatgttggaccaagaggtccttatggaaatccagggcaaaaaggagaaaaaggaaattca
gtgtatgtttcacattttggaaaaggacctccaggagacagaggtgatcctggacctcct
ggcatgcctggacctagagggtcaagaggtacaacgggcccatctggatacccaggccaa
ccaggcttgcctggtactccaggttaccctggtttgccaggtgaacagggaaatccaggt
attggagtggacggacaaaagggggagccgggtgatgttggacttcctgggccacctggg
tcaccactgttagttggacctcctggagctcagctgttcaaaggagaaaagggccaaaaa
ggactgcctggggtaacaggatacagagggccacgtggacccaaaggtgatcctggttct
tacggacctgcaggttttcctggaatgaagggggatccaggggaagaagggcccccaggt
cctcctggagctgttggaacttcgctgcttcctataaaaggtccacgaggagatcctgga
tttccgggtcctgctggtgatatgggagcagctggaccaattggtcgtgcaggcctgcta
ggaagaccgggagatgatggaacaagtctgcctggcctaccaggatcaagtggggcacca
ggacctcaaggttttcaaggtgaccctggtttccctggaacaggtgaatcaatcccagga
agacctggatttcctggaccaccaggcctaccaggacagccaggaagacagggcttacct
ggactacccagtgtaatctgtattgacagaggagtccctggagaagctggagcaaaaggt
caaataggccttccaggaagaaaaggtgaaaaaggagaaaagggaaatcaaggcctctgc
tcatgtagtgctggtcctcctggtccccgtggtatgcaaggacctccaggtactcaagga
aggaaaggacaaatgggataccctggaagacatggagagaagggtgacccaggcgtatct
ggtgcaatgggatcaccaggcctccctgggacacctggttctgctggacaacatggtgaa
aaaggagagaagggtgatccaggaagaattagaataaaaggaataaaaggtgaaagaggt
cctactggggttccaggatttccaggccaaagaggtaatgatggcagagatggggaacta
ggattgcctggggaaaaaggagaagagggccattctggagtaccactaccaggtgataaa
ggattccctggagtcccaggacttcctggggtaaaaggacagatgggattgcctggtttg
cggcttcccggccctccaggagtcagaggtagccctggagactttggtgatactggtaac
gttgggccacctggtccaaagggccagaaaggtgagactgtctgcatcacattaccgtac
cctggaaacccaggtccccctggttttaaaggtgttcaaggaccaaagggtttaaaagga
ctccccggccgtcctggaccaaatggctttgatgggcaaaaaggccatcaaggcaggcca
ggagcaggaatccctgggccagaaggctttcgaggcagagctggtgatcctggtgatgaa
ggtgaaagaggatctacagttgatggtaaagatggccctccaggtccacctggcatagat
ggtcagaaaggtgttccaggtgatacaacatatggtcctccaggaatcccaggcaacagg
ggacagccgggaccccctggtgcacaaggagcaaggggacagcctggtaccccaggattt
cctggtgcgaaaggttttagaggcccagaaggtgatacaggagcaccaggctgtccaggc
ttccctggtccaccatgtgacatgggcttaccagggccactaggactcagaggcgtcatg
ggcctgccaggacctcaaggcttaccaggctttaaaggacagaggggagacaggggccta
actgggccacctggaatcaaaggtctcaaaggctctcctggctcacgaggtcccccaggt
cctccaggctcccgaggacttccaggacttccaggcaataaaggaccacctggttttcca
ggacaaacaggaagcaaagggattcaaggaccccaaggatttccaggactcccaggaaca
caaggcccaatgggaatctctggtataaaaggtgaagaaggaaaaatgggtccgcctggg
cctagtggagagtgtggggatacaggaataaaaggtgaaagaggtcccccaggagacagt
ggctgtgttaacatccgtcttgagagaggacaaaaaggggagccagggtttcctggtgag
aacggatttagaggtgaaagaggtgaaaaaggcagtactggtttcagaggcaccccagga
tttccagggaagaacggtgtcccaggactgccaggtgaccacggtgacattgggctgatg
gggtttccaggaccacagggtttcccaggaccaaagggctttaaaggaatgacaggtttt
cgaggacatccaggtgaccagggtgatgttggcttaccaggaatccctggaaatgcaggc
ctgactggaccaaaaggatctaaaggcaagagaggtgacccaactcctctgcttggtacc
catggtcaaaaagggcctcccggagatccaggattaccaggactctgtggattcccagga
gagaaaggctcaccaggtatccaaggacaacctggaagaccaggatccaagggtgaccct
gggtacccgggaatacctggatttccaggagctacaggtcctcagggattgccaggagaa
cctggagaaaaagggaaacatggaattttgggacttccaggattgcaaggattacctgga
tctcagggtagaaaaggtgttcctggtctgcctggactggatggcttggatggactaaaa
ggtcaaaaaggttctgcaggagctccaggtcaaagtgaaatggggcccccaggatactca
ggagaacctggaccaaaaggagaccgaggtgaacctggacggcctggtatttctattcca
ggcccccctggagaaaggggattcccaggattcccaggtagaagaggacctattggaccc
cctggacctatgggaagatctcgtgatagtgcttctcctggtcctccaggtgatcaagga
ccacctggttttgatggcatcagaggtcagcctgggaatcctggtcctcctggagagact
atcttcgtgcgaggagatccaggtgatatcggtattcgaggggcaccaggtaatcctggg
cagcgagggcaacaaggagccagaggtcttccagggaaccaaggaagaggaggcccaaag
ggtcctatgggaatccatggcccacagggtccacctggtgctataggacatccaggagac
caaggttttcaaggaatacctggtcccagaggtcccacaggtacttatagcattccaggt
gatcctggtgaaccaggaaaaatagatgattcatgccctgcaatcccagggcttcctggg
gaagcaggccaaagaggagacgatggctctgtaggattaccagggccaataggccaccct
ggaccccaaggaagaaaaggtgaagaagggtcatgtggcctgccaggtcaagatgggtta
cctggggcatctggaccaccaggtgaccaagggcatataggagagcacggatatgctggg
ccacaaggtccacctggccagactggtatcccaggaccaccaggcccccatattagatct
gcaagtggattcttgctcgtccttcacagtcagtcagacagagaaccactctgtccacag
ggtatgccaaaattatggactggctatagtctgctgtacctggaaggacaggagaaagcg
cataatcaagatcttggtctggcaggatcttgtcttcctgtgtttaataccatgcccttt
gcttactgcaatatcaaccaagtttgttactacgccagtcgaaacgataagtcttactgg
ctgtcaagtgctgctcctttaccaatgacaccactctctgaagaagaaatacaaccttat
ataagcagatgtgctgtatgtgaggccccagcccaagcggtagcagttcacagccaggat
cagtcaattcctccctgcccagcaaactggaggagcctttggataggatattcttttttg
atgcacactggatctggtgatcagggtggtggacagtcccttatgtcacctggaagttgc
ctagaagacttcagatcagcgccattcattgaatgccagggtcagcgcggaacatgccaa
ttttttgctaatgaatacagtttctggctaacaaccgtgatgcctgaactgcagtttgcg
tcagccccgctgtcaggaactcttaaagaaggacaagagcagaggaaaaaaatcagtaga
tgccaggtatgcctgaagcatggctaa
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integrated database retrieval system
