Tauraco erythrolophus (red-crested turaco): 104374989
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Entry
104374989 CDS
T08611
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104374989 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
teo01009
]
104374989 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
teo04515
]
104374989 (PCDH20)
Protein phosphatases and associated proteins [BR:
teo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104374989 (PCDH20)
Cell adhesion molecules [BR:
teo04515
]
Cadherins
Protocadherins
104374989 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
He_PIG
Motif
Other DBs
NCBI-GeneID:
104374989
NCBI-ProteinID:
XP_009979566
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
PPLSFTLASRGLGEQYVQLDNRSGELHTSAVEIDREALCVESNGATIFGGAAAVSISSSS
SSSESCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPRFPVPHIHLSVPENAPVNTRLAI
EHPALDPDVGTNGVQTYRLRDNYGVFTLDVEENESGERTPYLIVMGALDRETQEEYVTVI
VAEDGGTPPLVGSATLTIGISDINDNCPQFSDSQLNVTLYGNSSLGTHVATVHAVDMDLG
SNAQITYSYSQKVPQPSRDLFHLNESTGAVTLSSKVDGDTPRLHRLIILGNGPGCIPAVI
TVLVTIIKVMMRPPEVVPRFIANEAEGVVYLKELEPINTPIAFFTIKDPDEKYKVNCYLD
GDGPFRLSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEGFHVNRVIKVQILDDND
NSPVFSQQLIELSIEENNVPNAFLTKLHATDADSGERGQVSYFLGPDAPSYFSLDKTTGV
LTVSTQLDREEKEKYRYTVKAVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPE
NFPGFGEIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYVL
WIEAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAV
DKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYP
EPLHSTVMVNLFVNDTVSNESYIESLLRKEPDISIEEKQPQISIEPAHKKMESASCMPTL
VALSIISLGSIALVTGMGFYICLRKGKKHHRGEENLEVQIPLNGRINLHMLEKKPMEISN
I
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
cccccgctctccttcacgctggcctcccgtggcttgggggaacagtatgtgcagctggac
aaccgctccggggagctgcacacctcggccgtggagatcgaccgggaagctctgtgcgtg
gagagcaatggggccaccatctttgggggagcagctgctgtctccatttcctcctcctcc
tcctcatctgagtcatgcttgctgctactggatgtgctggtgctaccacaggagtacttc
cgcctggtgaaggtaaaaattgctatccgggatgtcaatgataatgcaccccgcttccct
gtgccccacattcacctctcagtgcctgagaatgcacctgtgaacacccgcctggctatc
gagcatcccgcccttgaccccgacgtgggcaccaacggtgtccagacctaccgcctgcga
gataactacggcgtcttcaccctggatgtggaggagaatgagagtggggagaggactccc
tacctgattgttatgggggctctggacagggagacacaggaggagtatgtcacagtcatc
gttgctgaggatggggggactcctccactcgtgggcagcgccaccctcaccattggcatc
agtgacatcaatgacaactgcccccagttcagcgactcgcagctcaacgtgaccctttat
gggaattccagcctagggacacacgtggccactgtccatgcggtagacatggaccttgga
tccaatgcccaaatcacctactcctacagccagaaggtccctcagccatccagagacttg
ttccacctgaatgaaagcacaggagccgtcacgctctccagtaaagttgatggggacact
ccaaggcttcacaggctgatcatactgggcaatggtcctggttgcatccctgctgtgatc
acagtgctagtgaccatcatcaaagtcatgatgaggccacctgaagttgtccctcgtttc
atagctaatgaagcagaaggggtggtgtacttaaaggaactggagcctatcaacacaccg
atagcattttttaccatcaaagaccctgatgaaaaatacaaagtcaattgctatttggat
ggtgatgggcctttcaggctttcaccatacaagccatacaacaatgaatacctattagag
accacaaagcctttggactatgagacacagcagctgtatgaaatctctgtagttgcatgg
aactcagaaggttttcatgtcaacagagtaatcaaagtacagattctggatgacaacgac
aactcgccagttttctctcaacagctgatagaattatccattgaggagaacaatgttccc
aatgctttcttgaccaaactgcatgcaactgatgctgacagtggagaaagaggacaagtg
tcctatttcttaggtcctgatgctccttcctatttttctttagataaaaccacgggagtt
cttacagtttccacccaactggacagagaagaaaaagagaaatacagatatactgtcaaa
gcagtagattctgggttccctccaagagaatcaatagcaactgtcaccattacggtattg
gataaaaatgataatagtccaagatttatcaataaggatttcagctttttcgtgccagaa
aactttccaggtttcggtgaaattggagttataagtgtcacagatgctgatgcagggcaa
aatggatgggttgccctttcagttctgaacggaagtgatatttttgtcatagatactgga
aaaggagttttgagagctaaagtctccctggacagggagcagcaaagctcctatgttctg
tggattgaagcagttgatggtggtgatcctgccctgtcttctacagcaaaaataactatc
cttcttctggacataaatgacaacccccctttggtcttgtttcctcaatctaatatgtct
tatttgttggtccttccttctaccctccctggctctcccatcactgaggtctatgctgtc
gataaggacactggcatgaatgcagtcatagcttacagcatcataggaagaagaggccct
cgaccggaatcatttaggattgaccctaaaactggtaatatcaccttggaagagtcactg
atgcaaaatgactatggcctctatcgtctgcttgtaaaagttagtgatcatggctatcca
gaacctctccattccactgtcatggtgaaccttttcgtcaatgacactgttagcaatgag
agctacattgaaagtctgttaagaaaggagcctgatatcagtatagaagaaaagcagcca
caaatatccatagagcctgcacataaaaaaatggagtcagcatcctgcatgcctaccttg
gtagctctgtcaataataagcttgggttcaatagctttagtaacagggatgggcttttac
atctgtctaagaaaaggtaaaaagcatcacagaggagaggaaaacttggaagtacaaatc
ccattaaatggaagaattaacctgcacatgttggagaagaaaccgatggagatttctaac
atttga
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