Tauraco erythrolophus (red-crested turaco): 104375033
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Entry
104375033 CDS
T08611
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teo03019
]
104375033 (PTBP1)
03041 Spliceosome [BR:
teo03041
]
104375033 (PTBP1)
Messenger RNA biogenesis [BR:
teo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104375033 (PTBP1)
Spliceosome [BR:
teo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104375033 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
104375033
NCBI-ProteinID:
XP_009979581
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MGIERGSDELFSTCVTNGPFIMSSNSSSVGVHSNGNDSKKFKGDSRSAGVPSRVIHVRKL
PSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPVLRSQPI
YIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQSPVLRI
IVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNI
YNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAFGAPGIISAS
PYAGAGFPPAFAIPQAAGLSVPHVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLL
VSNLNPEVITPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGQKLH
GKPIRITLSKHQTVQLPREAQEDKGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSN
IAPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENH
HLRVSFSKSTI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgagcggggatctgacgagcttttctctacttgtgttactaacggacccttt
atcatgagcagcaactcttcttctgtgggtgtgcactctaatggaaatgacagcaaaaag
ttcaaaggcgatagtcgaagtgctggggtcccatcccgagtaatccatgtccgtaaactc
cccagtgacgtcacggaggcagaggtcatttctttgggcttaccttttggcaaggtcacc
aatcttctcatgctgaaaggaaaaaatcaggctttcatagaaatgaacacagaggaggca
gccaacaccatggtgaactactacaccacagtcactccagtccttcgcagccagcccatc
tatatccagttctccaaccacaaggagctcaagacggacaactctccaaaccaagcacgt
gcccaagcagctctgcaagcagtcaactcggttcagtccggaaacttggcgctgtcagcc
tctgctgcagccgtggatgcaggaatggcgatggctggccagagccctgtcctgaggatc
attgttgagaacctcttctaccctgtcactctagatgttctgcatcagattttttccaaa
tttggtacagtcttgaaaataattacattcacgaagaacaaccaatttcaggccctgtta
caatatgctgacccagtgagtgctcagcatgccaaactgtctttggatggacagaacatc
tacaatgcctgctgtacgctgcgcatagatttctcaaagctcacgagtctcaatgtaaaa
tacaataacgataagagcagagactatacacgaccagacctgccttctggggataaccag
ccctctctcgatcagaccatggcagctgcttttggtgccccaggaataatctccgcttct
ccatatgcaggagctggctttcctcctgcctttgcaattcctcaggctgcaggcctgtca
gttccacatgtccatggagcactagctcctttggctatcccatcagcagcagctgcagcg
gctgcggcaggacggattgccattcccggcctcgctggggcagggaactccgttctgctg
gttagcaatctgaatcctgaggttattacaccccaatgcctctttattcttttcggagtc
tatggtgatgtgcagagggtgaagattttatttaataagaaggagaatgccctagttcag
atggctgatggaaaccaggcccagcttgccatgagccatttaaacggtcagaagcttcac
gggaagccaatccgtataacgctgtccaagcaccagacagtacaacttccccgcgaggca
caggaagacaagggtctgactaaggactatggaaattctcctctacatcgtttcaagaaa
ccaggctccaagaatttccaaaacatctttcccccttctgccactcttcatctgtccaat
attgcaccttcaataactgaagaagacctcaagatgttattttcaagcaatggtgggatg
gtcaaaggattcaaattcttccagaaggaccgtaaaatggctctgatccagatgggctct
gtggaagaagccattcaatcgctcattgacctccataatcatgacctgggtgagaatcat
cacctgcgtgtgtccttctcgaagtccaccatttaa
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