Tauraco erythrolophus (red-crested turaco): 104375879
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Entry
104375879 CDS
T08611
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo04510
Focal adhesion
teo04512
ECM-receptor interaction
teo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104375879 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104375879 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104375879 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
teo04147
]
104375879 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
teo00536
]
104375879 (COL4A6)
Exosome [BR:
teo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104375879 (COL4A6)
Glycosaminoglycan binding proteins [BR:
teo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104375879 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104375879
NCBI-ProteinID:
XP_009980640
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MTMWPEKDEFLAHVSDSENDPIMDKLKHNYILPFISQQIRMTNVTQGGKKSYSGPCGGRD
CSAGCKCFPEKGARGRPGPIGLQGPIGAPGFTGPEGLPGAKGERGAVGPPGPAGQKGDKG
PMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTTGSPGVSGSDGFPGLPGLPGRPGPKG
LKGEPVFAQGGLKGLKGENGLPGLDGVSGPKGFPGPIGSAGPIGLPGLQGPMGPPGPPGP
KGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGFPGDKGL
PGLPGFGGVGEKGEKGVPGLPGGRGLLGLDGSDGIPGRKGHPGIPGYPGLDGVEGMKGEL
GDIGPPGPPIVIDREGVVVSGAPGDPGNPGVPGPPGDEGISGLPGLPGAPGFPGLERDGM
GPGGSPGIPGVKGEVGEPGRATIGLPGTTGRDGLPGLPGAPGLPGSPRPSFPPDTILDGR
AGAPGEPGQRGLPGALGPKGYKGEAGDCACDGGVTRAGLKGISGPPGPSGSPGFPGIKGI
GGDPGTVGTPGLRGPPALSGQQGLPGLKGEKGDPSYATGRGAPGDRGATAPRGPSGIPGT
PGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGVGYPGPSGVRGPPG
DPGVDGFPGQAGLPGPPGITLPCIVPGAYGPPGTPGFPGLPGPKGSKGFPGIPGQPGLHG
SKGQPGTPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGATGLAGTKGAPGDVF
GAESGTLGERGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQGNPGYSGVPGLRGP
PGPGGPFGIKGKPGPLGSVGLAGAPGCQGLPGVKGLTGDVGPQGPAGMKGFPGLDGAPGS
PGERGFLGPPGPFGQDGRPGFSGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGAPGTAGE
KGSPGVVGLQGQKGDRGDVGPPGLPVLGPPEQALQFKGDKGDPGLAGLGGFPGPRGDKGI
PGSRGQPGLPGPVGSASKERGLHGDPGFPGPPGQPGLPGQKGTHGIIGFPGMPGERGSDG
ITGTLGFPGPVGLPGPKAGPKGERGDPGFPGERGREGLKGEPGYPGNTGVNGLKGGPGDL
GQEGPAGVPGNAGPRGIPGPPGPPGQPGSVGFPGAQGTAGPKGFHGFPGLNGLNGLPGTK
GSPGTPGLSEAGLKGPAGLPGPKGEEGSPGLGRGAPGFPGPKGSSGDTGPPGPVGLPGLP
GTPGASLPSDIRGRPGDAGHPGTDGSSGLPGLPGPQGPPGPASDQGDTGNPGFPGVLGLR
GIKGDVGPTGPVGLPGASGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGVPGQQ
GAPGITPQPEEVTAPAGLPGLPGIDGVPGFDGDPGFQGPAGKPGTKGLPGRSGLKGRDGL
PGSPGIAGDPGPLGAPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCP
IGMNKLWDGYSLLYVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSY
WLSTTAPIPMMPVDSAQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSF
LMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEPSQQF
VSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgtggcctgaaaaagatgagttcttggcacacgtcagtgattctgaaaatgac
ccaattatggacaagttaaaacataactatattttgccatttatttcccagcagattcgg
atgacaaatgtaacgcagggtggaaagaagtcttacagtgggccatgtgggggccgtgat
tgcagcgctggatgcaaatgttttccagaaaagggtgcacggggtcgaccaggaccaatt
gggcttcaaggaccaataggtgcacctggatttactggcccagaaggtttaccaggagca
aaaggtgagagaggagcagtgggcccccctggaccagctggacagaaaggtgacaagggc
ccaatgggcgttccaggatttcaaggcatcaacgggatcccaggtcaccctgggcaatct
ggacctagaggtctgcctggcctcgatggctgcaatggtaccactgggagtcctggcgtt
tctggatcagatgggtttcctggcctccctgggctgcctggtcgtcctggcccaaaaggc
cttaaaggagaacccgtttttgctcaaggtggtcttaaaggattgaagggagaaaatgga
cttcctggattggatggagtttctggcccaaaaggttttccaggtcccataggttctgca
ggccctataggattaccaggtttgcagggtccgatgggtcccccggggccaccaggtcca
aaaggtaacatgggattaggctttcaaggagagaaaggagaaaagggcgatgtagggctg
cctggtcctccaggtcccccaccatccactggaatactggaattcatgggatttccaaaa
gggaaacaaggagaaaagggtgagccaggccctcaaggattccctggagacaaaggattg
cctggcctgccgggctttggaggtgttggagaaaaaggagaaaaaggtgtgcctggttta
ccaggtggcaggggtcttttgggactggatggatctgatgggattccagggagaaagggt
catccaggtattccaggctatccaggactggacggagtcgaaggcatgaagggtgaatta
ggtgacattggtcccccaggccctcccatcgttattgacagggaaggtgtagtcgtatca
ggtgccccgggtgaccctggaaacccgggagtacctggtcctccaggagatgaagggatc
agcggtttaccaggccttccaggagctccagggtttccaggcctggagagagatggaatg
ggccctggagggtctccaggtattcctggtgtgaagggtgaagtgggagaaccaggaaga
gcaacgattggattgccaggcactactggcagagatggtttaccgggtctgccaggagca
ccaggattgcctggttcaccacgcccttcgttccccccagacacgatcctggacggaagg
gctggggccccaggggagcctggacaaagagggctgcctggagctttgggtccaaagggc
tacaaaggagaggcaggtgattgtgcttgtgacggaggagttacaagagctggtctaaaa
ggcatctcaggtccaccaggtccatcgggaagccctggttttcctgggattaagggcatt
ggtggagacccaggcactgtgggcacaccaggactgcgaggccctccggctttgtctggt
cagcaaggtcttccaggccttaagggagagaaaggggatccatcctatgcaacaggcaga
ggagctcctggggaccgtggtgcaacagcacctagaggaccttcaggcatcccaggaacc
cctggcagggatggacttccaggcttgccaggcccaccaggccctccaggtgatggtgga
ctaggtttcccgggcgaaaaaggactgccaggattacctggctccaagggccatcgtgga
gaaactggttctcctggtgttggatatccaggtcctagtggagttcgtgggccgccaggt
gacccaggagtggatgggtttccagggcaagcaggtcttccaggccctccaggtatcacc
ttgccctgcatagttcctggagcatacgggcccccagggactcccggctttccaggattg
ccaggtcccaaaggcagcaaaggctttcctggcattccaggtcaacccggattacatggg
tcaaaaggacagccagggactccaggaataataggcttacaaggggaacctggcttccct
gggcctcgaggagagcaagggtcacaaggacttccaggactggatggaacagatggtttg
cctggcaaaatgggtgctacaggcttagctgggacaaaaggagctcctggagatgtattt
ggtgctgagagtggaaccctgggagagcgtggccgacctgggctaccaggtgataaagga
cttacaggtgatcttggatttccgggaccaaaagggttagatggaagaccaggccttcta
ggtattaaaggcgaacagggtaatccgggatattcgggtgtccctggattgcggggacct
cctggtcctggaggtccttttggcattaagggaaaaccaggacccttggggtcagttggc
cttgcaggagcaccaggctgtcaagggcttcctggagtaaaaggcttgactggggatgta
ggtccacaaggccctgctggtatgaaaggcttcccaggtctcgatggtgctccaggatct
cctggggaaagaggattcttagggccacctgggcctttcggtcaagatggacgtccaggt
ttctctgggccaaaaggcgagaaagggtcttctggcctgcttggtttccctggcatgcca
gggctgcctggtgtccctggggtgaatggctttaaaggagctcctggcacagctggagaa
aaagggagccctggagttgtgggactccaaggtcaaaaaggtgacagaggtgatgtaggt
ccacctggtcttcctgttcttgggcctccagaacaggcactgcaattcaagggagacaaa
ggagatcctggattagctggacttggaggattccctggacctagaggtgataaaggaatt
ccaggaagccgtggacagcctggtctccctggtccagttgggtcagcaagcaaagagaga
ggtcttcatggtgatccaggcttccctggtccacctggacagcctgggctgccaggacag
aagggtacacatggtatcataggatttccgggaatgccaggagagaggggttcagatggt
atcacaggaacacttggattcccaggacctgtcggcctccctggtccaaaggctggacca
aaaggagagcgaggggacccggggttcccaggagagagaggcagagaaggactcaagggt
gaaccaggctacccaggaaacactggggtgaacgggctcaaaggtggcccaggagatctt
ggccaagaaggaccagcaggagtccctggaaatgctgggccgagaggaatccctgggcca
ccaggacctccagggcagccaggatctgtcggattccctggagctcagggaacagcagga
cctaaagggtttcatggatttccaggtttaaatggtctgaatggcttgccaggcacaaaa
gggtctcctggaacaccaggtctgagtgaagctggactgaaaggtcctgcaggtctaccg
ggtccaaagggtgaagaaggttctccaggcttgggtagaggagctccaggattccctgga
ccaaaaggctcatcaggagacacgggtccccctggtcctgtgggactgcctggcttgcca
ggaacacctggagcttctcttccttctgatatacgtgggagacctggggatgctggtcat
ccaggaactgatgggagttcaggtcttccaggtcttccaggaccacaagggccccccggc
ccagcttctgaccaaggtgacacaggcaatccaggtttccctggtgttcttggcttgcga
ggcattaagggtgacgtgggacccactggtccagttggactccctggagcgtctggattc
aaaggtgtaagaggggagcctggcctcatggggatgccagggaaagatgggcctccgggg
gatcctggttaccctgggctgaaaggtgaaatgggccgtcgaggtgtccctggccaacaa
ggggctccaggtataaccccacagccagaagaagtcacagcccctgcaggcttacctggt
ctgccaggaattgatggtgtccctggctttgatggagatcctggattccagggcccagct
ggaaaaccaggtacaaaaggtctgcctggaagatctggtttgaagggacgtgatggttta
cctggatcacctggcatagctggggatccaggacctttgggtgccccgggaccacaggga
tttgaaggtgttgctggaaagccgggctccctcggtttgccgggaatgccaggtcggagc
gtgggtgttggctacactttagtgaagcacagccagtcagaccaaatcccgccttgtccc
ataggaatgaataagctctgggatggctacagcttattgtacgtggaggggcaggaaaag
gcacacaaccaggatcttggttttgctggctcgtgtttgccccgcttcagcaccatgcct
tttatttactgcaacatcaatgaagtgtgctactacgccagccgaaatgacaagtcctac
tggctctccaccactgctcccatccccatgatgccggtggacagtgctcagatcccacag
tacatcagccgttgctcagtgtgtgaagcaccttcccaggccgtggctgtgcacagccag
gacatcaccatcccacagtgtccccttggttggcgcagcctatggataggatactccttc
cttatgcacactgcagctggtgcagaaggtggaggtcagtccctcgtctcacctggctct
tgcctggaggatttccgtgctactcccttcattgagtgcaacggtgctcggggaacgtgc
cattactttgcaaacaaatacagcttctggctgacgacggtggaaccgtcgcaacagttt
gtcagtgctcctccctccgaaacgctgaaagcgggacagctccgaaccagggtcagccgc
tgccaggtgtgcatgaagaacttgtag
DBGET
integrated database retrieval system
