Tauraco erythrolophus (red-crested turaco): 104376667
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Entry
104376667 CDS
T08611
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104376667 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teo03019
]
104376667 (EDC4)
Messenger RNA biogenesis [BR:
teo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104376667 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
104376667 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
WDR55
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104376667
NCBI-ProteinID:
XP_009981583
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MSIRRSQFGNWKPALLPDDVPLARSYGSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSL
AKPVHRSISLGALQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYCGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDNTPLNTSRRIIWCPFI
PDDNEESGEEGSQTLALLHEDRAEVWDLDIIRANHSSWPVEVPSIKEGFIVVKGHSTCLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELTQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSIEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMSTSMPSHGSH
EEFAFPDHMADLSTEGLGSEKGSMHGSQPDLRRIADLPVPADFLALSNDAKPKLMTPDAF
MTPSASLQQIAVSPGSSVSSLTAVTAMSSTSVTDASLPRPSEDLTVSPKMQLDTSLTLSS
SSSSIQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNPALALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAAAPSGLPAEVLEPGHHADSMASAASALHLLSP
RNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
TQRLPVKDWKAKASPRASPKLKRKGKKDDGDLNQSPRSSNNQVTPEFQDELMCILRSQQR
ELSELRQNQMDLLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQL
QEHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPIAGQLSNTIAAKLTAVEG
TLKESITKLVKSKNLTDTIVRATADTLQGPMQSAHREAFQSVMLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLEAHLKNKKVREQEARDPLLNQLRQLISTFQSTTEQLASTVAASVHAE
VQHQLHVIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHL
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLL
SLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLHVEPHN
PLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatacgtcgaagccagtttggtaactggaagcctgccttgcttccggacgacgtg
cctcttgcccgcagttacggttcggtgaatgagaaccagagaccctcaaattcgtataac
ggagacctaaatggactgctggtgcctgatcccatcgtggccggagatggaccttctctg
gctaagccggtgcatcgcagcatttctctgggagctctgcaggagaagcaagtcatctgc
ctttccggtgatgacagctccacttgcatagtgatatcagcaaaagatgtggagatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacag
cctgttgctagatatgactgggagcagaaatactattgtggcaacctgatagctgtttca
aactcctacctggcttatgccattagagctgccagtaacggctccgctatggtgcgggtg
ttgagcgtcagcactgctgagcggaccttgctgaaaggcttcacgggtggtgtggcagac
ctggcgtttgctcatctcaactccaaccagctggcgtgcctggatgaggccggcaacctt
tttgtctggcgcctggccatggataaagaaaagatccaagaggagatcttggttaacatc
aagcgacctgacaatactccgttgaacacctctcgacgaatcatctggtgtcctttcatc
ccagatgataatgaggagagcggtgaagagggaagtcagacgttggccctgttgcacgag
gacagggcagaggtgtgggatttggacattatccgagcaaaccacagctcctggccagtg
gaagtgccgagcatcaaagaaggcttcatcgtagtgaaaggccacagcacgtgcctgagc
gagggagcgctttctccagatggaactgtgttggccacagcaagccatgatggttttgtc
aaattctggcagatctatattgaggggcaagacgagccaagatgtctccatgagtggaag
ccccatgatggtagacctctttcctgcctgctcttctgtgacaaccataaaaaacaagac
ccagaggttcccttctggagatttctcatcacaggagcagatcagaatagagaactgaag
atgtggtgcactgtgtcttggacttgtctgcaaactgtccgcttttctcctgacatcttc
agctccatgagcattcttcccagcctgaaagtctgcctggacctctccgctgaatatctg
atactgagcgacgtgcagagaaaagtgttatatgtgatggagctgacgcagaaccaagag
gagggtaaagcttacttcagctccatctccgagttcctccttacccacccagtcctaagc
tttggcatccaggcggtgagccgctgccggttaaggcacaccgaagtgctcccggcagaa
gaggagaatgacaacttgagcatagaaggtgcccagggagctggggctgtcgaatcagca
gcaggcgtgctgataaaactcttctgcgtgcacaccaaagccctacaggatgtgcagatt
agattccagcctcttcatagtcctgacatgagcacgtccatgccttcccatggctcccat
gaagaatttgcctttccagaccacatggctgatctaagcacggaagggctgggatctgaa
aagggatcgatgcacggctctcagccagacctgcggcgtattgctgacctgcctgtgcca
gcggacttccttgctctctccaatgatgccaaacctaagctgatgactcccgatgcattc
atgacaccaagtgcatctcttcaacagatcgctgtgtcgccgggcagcagcgtcagttcc
ctgactgcagtcacagccatgagcagcacttctgtcacggatgcctctctgcccaggcca
tcggaagacttgactgtgagccccaagatgcagctggacaccagcctgacactgagcagc
agtagcagcagtatccagactagccctaggagccattcagttcttatcccaggcctccct
gacaagctaacgccaaaggcacctgttccagtcacgccaggaaaccccgctctagcactg
gagctgcaggaagtggagcccttggtggtaccccaggcttctcccacccgtgagcgctcg
ccagatgtcatttcctctgcttccacagccatgtcccaagatatcccagagattgcttcc
gagaccttgcaacgcagcttcgcggcagctccgtctgggctccctgcggaggtgctggag
cccggtcaccacgcagacagtatggcatccgctgcctcagccttgcatttgctgtctccc
aggaaccggcacaattccgagcacagccaccactctttggacatgcctccagtggaggtg
gacagactgaatgctccatcgttactggagactgctttaactcaggaaaacgcgtcttct
gacagtgttgtgagtcagccatggccagcagctcctgacatcaccagagaaaccaggaac
agcatggcagacagcccaagggatgaggttgaagaaaaacacaagagctcttcctatcat
cgacacagctaccacctgctgcagcatgacagccaggatgcaagcgcagaacaaagtgac
catgatgacgaagttgcgagcttggcttctacgtcaggtggattcggtgccaaagcgtct
acgcagaggctgcctgtgaaggactggaaagccaaggcatcccctcgggcttccccaaag
ctaaagcggaagggcaagaaagacgacggggacttgaaccagtcgccgagatcatctaat
aaccaggtgacaccagagttccaggatgagctgatgtgcatattgaggagccaacagcgg
gagctctccgagctgcgtcagaaccagatggacctgctgcagagactcacggatcacctc
gatgccattcagagctccctcatgggccacgtggagagggtgattgactcccagcaggag
caggagcagagaagactagaccgagcgctgacggaaggacagcagcgcaatgggcagctc
caggagcatctgtctcagcagctctctcagtccctttccaccgccgtgtgtaaccgtctg
gagaggaccattcgcgaggagatgaagaagactgttccccagtgcatttccaagagcatg
gacccgatcgctggccagctgagtaacactattgctgccaagctcactgctgttgaggga
acgctgaaagagagtatcaccaagctagtgaaatcaaagaaccttacagacaccatcgtg
agggcgacggccgataccctgcaggggccgatgcagtcagctcacagggaagcgtttcag
agcgtcatgttgccagccttcgaaaagagctgccagtccatgttccagcagatcaatgac
accttcaagcagggcacgcaggaatatatccagcagcttgaggctcatttgaagaacaag
aaggtacgagaacaggaggcccgggacccgctgctgaatcagcttcgacagctcatcagc
accttccagagcaccaccgagcagttggcttccactgtcgcagccagcgtccatgctgag
gtgcagcatcagctgcatgttatcgtgggcaacatgcaggagtctattttggcccaagtg
cagagagtcattaaaggtgaagtgagcctggctatgaaggagcagcaagcagctgtcacc
tcgagcatcgtccaggcaatgcgctcggcggccggcactccgatcccctctgctcacttg
gatttccagtctcagcagactcacatccttcagctgctccagcagggacacctcaaccaa
gcttttcagcaggctctaacagcagctgacctcaacctggtcctgtacgtctgtgagact
gtggatactcagcaagtattcggacagcatccgtgcccgctgtcccagcccgtgctgctc
tctctcattcagcagctctcctcggatttgggcactcgtacggagctgaagttgaattac
ttggaggaagcagtgatgcacctggaccacagtgaccccatcaccagagatcacatgggg
tcagtcatgaaccaggtgcggcagaaactcttccagttcctccacgtggaaccccacaac
cctctgagcaagcctgcccgtcgcctcatgatcatgctccagggcctggtcacccctggc
atgacctag
DBGET
integrated database retrieval system
