Tauraco erythrolophus (red-crested turaco): 104378049
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Entry
104378049 CDS
T08611
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teo03019
]
104378049 (HELZ)
Messenger RNA biogenesis [BR:
teo03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
104378049 (HELZ)
3'-5' decay
Other 3'-5' decay factors
104378049 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
104378049
NCBI-ProteinID:
XP_009983262
LinkDB
All DBs
Position
Unknown
AA seq
1941 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHTPELSVTVTTKKSHQIWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVMK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANTTKQQQSPPKGKVHHHNQNDHF
PPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNMVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPVS
IGQQQQLQHQDKEQHEQSRNGKSENAAGPEISKIRTPEKKPVESKQVDLEANSQNRSPES
RSSVGYPNAKFHRKDNLNPRQLNLHLTPPHSQYAVPNRHFQHVSQIPRQPYPLQQQQNLL
SQQQNHLPEPQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNPIPHRPH
SPAVDAVISEQHPPPMLQEVNNPLRPIAQHNSVLPTHLNNFIEENPSGIPLGDTLDRMHG
NVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRANW
KLASNAEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRSPPALP
SPSCNSNHSGHFPNFTENSRDLEIPSNPAFPQHLPQIYNPPFSMPSEHITPSPLKYLQPD
GSWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHAVGQEPFHPLTSRAVSAS
SLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNYSS
PELWVNSSSSAPYPNIPCNGANRAVPPRELLAPPKTVKPPEEHLKAENIQLSNSFNYSVL
QHLGQFPPLMPNKQIVESNSNSQQNAGGNKPVMSYASALRAPPKPKPPPEQTKKNSDPLS
LFQELSLGSSSGSNGFYSYFK
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatcccttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttgcaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgcctgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcccgggatggctggcagttccgccctccacccaggggggtcacaagcagtgaagaatat
acgctatgtaaaagatttttagagcaagggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagagctaacagaatggcaaaaacgatatgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacaatgttcgggcagttatatggaaaccttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggcgtgaga
gtagaacatactcctgagctatcagtaactgtcaccaccaaaaagtctcatcaaatatgg
acatttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtattgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaacgga
atagatcattatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgattttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcatgcacgacaacagctactaacc
acagctaagcgttgggattctacttcgaagactattgtagaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaattcctctatctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctacat
gacctcctttacatcgaggaaatagcacagtacaaggaggttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaagtac
gcccaaaacggacaactttttggccgctttaagctcactgaaacgctttccgaagacact
ttggccggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcatgaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaagattatatcttcttgagggtatccagggaatgctgcgaagagcttaatctt
cgggcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgccttggacaggattaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctaaatgcgaagcagaaagaggctgttctggctatcactactccactttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaacgttcactctggctcaggca
gtcaagcacatactccaacaacaggatactaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttccgaaatcgctgggtaaagactgtccacccagttgtg
catcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaagac
attcttaagcaacgagtagtagttgttactttaaatacatcacagtatctatgtcaattg
gatcttgaaccaggtttttttacacacattctgttagatgaagccgcgcaagctatggag
tgtgaaactattatgcctctagcactagctaataaaaacacaaggattgtcttggctgga
gaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaaccttcat
gtttcattgcttgatcggctctatgagcactaccctgcagaatttccgtgcaggatcttg
ctgtgtgagaactatcgctcccatgaagctatcatcaattatacatccgaacttttctat
gaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttgact
ttcttcacagcacgtggagaagatgtgcaggaaaaaaatagtacagctttttacaataat
gcagaggtgtttgaagtagtagagcgtgttgaagaattaagaagaaaatggcctgttgcc
tggggcaaattggacgatggcagtataggtgtcgtaacaccttatgctgatcaagtgttc
agaattcgggctgaacttcggaaaaaaagactgtctgatgtcagcgtagagagagtgcta
aatgttcagggaaaacagtttagagttttgtttctcagcacagtacgaacacggcataca
tgcaaacataagcaaacaccaattaaaaggaaagagcagttactggaggattcaacagaa
gacttggattatggttttctgtccaattacaaacttctcaacactgccattacaagagca
caatccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgcagg
aaattttgggaaaggtttattgccctgtgtcatgagaatgaaagtctccacggtatcaca
tttgaacagatcaaagctcagttggaagctttggagttaaagaaaacttatgtgttgaac
cctctggctcctgagtttatcccccgagctcttcggcaccaacattcagcgaataccacc
aaacagcagcagtcaccaccaaagggcaaggtccatcatcacaaccagaatgatcatttc
ccacctgatggaattgttcagcccaatccttctgttctaattggaaatcctatccgagca
tatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagtcct
gttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctatgga
ggaaatatggtcatgtctgtgcctttgcctgtaccatggacggggtatcagggtaggttt
gcagttgaccctcgaatcattactcatcaagcagctatggcatataatatgaacctgtta
caggcacatgggcgtgggtctcctataccttatggcctgggacatcattcaccagttagc
ataggacaacagcagcagcttcagcatcaagacaaggagcaacatgaacaaagtcgaaat
ggtaaaagtgagaatgctgctggacctgaaatcagtaaaattcgaacacctgagaagaaa
cctgtggagtccaagcaggttgacttagaagcaaattctcagaatagaagcccagagtca
cgttccagtgtcggttatcctaatgctaaatttcatcgcaaagataatcttaaccccagg
cagctgaatctacatctcaccccaccccactcacagtatgcagttcccaatcgccacttc
cagcatgtgtcacagataccaaggcagccatatcctctgcaacagcagcaaaacctttta
agtcaacaacaaaatcatttgcctgaaccacaaaaccaaatgccaccccagcaaagccag
gtagttcagcagcataatcatttgaatcagcagcctccacaaccttcgcagctttcccct
gcttaccaggcaggccccagccagtctttttttaataatccaattccccaccgaccacat
tctcctgctgtagatgctgtgatttcagaacaacatcccccacctatgttacaagaagtc
aataatcctttgaggcctattgcacagcacaactctgttctgccaacccacttgaacaac
ttcattgaagagaatccatcaggaattcccctaggggacactttagatcgcatgcatgga
aatgtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatggaatgaa
cataatgcctatctcagtcaaggcactattccatatcaacaccatcaccatcctcatcta
ccacatcttcctcagcaaccaattggattgcatcaacagcagcaagttagggcaaactgg
aaacttgccagtaatgcagaagatgaaacagaggcaacatattcaagattccaggatttg
ctcagagaactgtcacaccgtgatcaaagtgaaagtcgggacttagctgaaatgccaccc
cctcagtcaagactgttgcaatacagacaagttcagcccagaagcccaccagcactccct
tctccttcctgcaactctaaccacagtggccactttcctaacttcaccgaaaacagcaga
gaccttgaaatacccagtaacccagcatttccgcagcatttaccccaaatatacaatccc
cctttctcaatgccatcggaacacataaccccatctcccttgaaatacctgcaacctgat
ggatcgtggacttacgccaacctccagcagaatcaccttatggggcagggctttcactat
ggcatacctccattgccccataggtcgcaacaaaacccttttatacagatacagaatcat
cagcatgcagtgggtcaggagccatttcatccactcacatctcgagcagtatctgcttct
tcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaaaga
agaatttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagacagt
cttggtcagtgtaaagagcttcaggaccacagtaaccagtcatctttcaactattcatca
cctgagttgtgggtaaactcctcctcatctgccccatacccaaacattccatgcaacgga
gccaacagagcagttccaccccgggagttgttagctccaccgaagacggtcaagccccca
gaggagcacctgaaggccgaaaacatacagctatccaattccttcaactacagcgtgcta
cagcatcttggccagttcccacccctcatgcccaacaagcagattgtcgagtccaacagc
aacagccagcagaacgctggtgggaacaagcctgtgatgtcctacgcaagtgctctgcgg
gctccaccgaagcccaaacctcctcctgagcagacaaaaaagaatagcgaccctttgtct
ttgtttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctatttt
aaataa
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integrated database retrieval system
