Tauraco erythrolophus (red-crested turaco): 104378612
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Entry
104378612 CDS
T08611
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03440
Homologous recombination
teo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104378612 (BRIP1)
03460 Fanconi anemia pathway
104378612 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teo03400
]
104378612 (BRIP1)
Enzymes [BR:
teo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104378612 (BRIP1)
DNA repair and recombination proteins [BR:
teo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104378612 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
104378612 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
104378612
NCBI-ProteinID:
XP_009983966
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MSSDMSEYTIGGVKIAFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQSLYEKSLLTSSCEKEDRKAKTSPPCRCACHSQSESNEAATTVNHGASCSSNNFER
GSSVKPGSPRKSTECKENETLASKLSAKKRLSLCASENDDFQVDRKRIRPLETEQQVRKR
HCLSKGVQLVDALEVYNQRRNGELIVHSEKSVKTTTFSPKISSGPCTECSCSSGKATDRD
ASNTKKKENGDRSFIPKIFFGTRTHKQISQITRELKRTAYSSVPMTILSSRDYTCIHPVV
SSSGTNRNEMCVELLEGKHGKSCLYYHGVHKLSEHHALQSAHRVYQAWDIEDLVSLGRKL
RACAYFAARELMVGADIVFCPYNYLLDPQIRESMDINLKGQVVILDEAHNIEDCARESVS
YGVTESQLRAAREELDFMVNNNIRQKDHAPLRAVCCSLINWLKESSSQLVERSYETSCKV
WSGKEMLPILHEMGITGIAFPVLQKHLATVLEKEEKVSVLGREELIEIPVVSPATQIMLR
GLFMVLSCLFKDKNRYADDYRVALQQTYAWMNENESDVSDASAFFTRPKRKRNLRQKTVV
HMLNFWCLNPAVAFSDLSDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHIIRNSQVW
VGTVGAGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKDR
WMHTGLWRNLELVKTVIAEPQGGTKSDFDELLKIYYDAIKFKGERDGALLIAVCRGKVSE
GLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKNTRGLLPGSQWYEIQAYRALNQ
ALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHENFGSALESLHSFARR
NQKGIDYSSECGSELLHVPSTSKDLSQASQQESTIHLSPGVPAKSEEQNLVSEINFATTF
SSVNPTASNQPSGQKVDVKSHSHHVTQRRKHMDSTPKMPPTETEREKKNDGTDSVIMKEH
CCLKQLTSTPLPVAKNYVSTASGKQKNANRASELIDSVNQCQSSLTSEHKPSVPESHLET
TNFLVTNTEASVEAVTHQTALQIEPCTEFPAAEGKSELSMLNVSAEAEDEDESIYFTPEL
YDDVESEEQEIRPQVPTCNTNENRTECGNSTVTDDHFAVNISETPGVTEKKIDDDGNTSL
HGIMQNEGSKDSAVNNVERTSEIEAEQITSQEMDTKKRKISLSRSRNKGVSSFLLSSSSP
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatatgtcagaatatactatcgggggagtgaagatcgcattcccttgcaag
gcttacccttcacaacttgctatgatgaatgctattgttaagggcttaaataacaggcaa
cactgtttgttggagagccctacaggaagtggcaaaagcttggcgttactttgttctgca
ttatcatggcagcagtctctgtatgagaagtcactgcttacgtcctcatgtgaaaaggaa
gacagaaaggcaaagacctcgccgccatgtcgctgtgcgtgtcactcccagtctgagagc
aacgaggctgcaacgactgtgaatcatggggcttcttgttcttctaataattttgaaaga
ggaagttccgtaaaacctggaagcccacgaaaaagcacagaatgtaaggagaatgaaacg
ctagcttcaaaattgtctgccaaaaaaagattatctctatgtgccagtgagaatgatgat
tttcaagtggacaggaaaaggattcgtcctttagaaactgagcagcaggttcgaaaacgg
cattgtctttcaaaaggagtgcagctagttgatgctttagaagtttataatcagagaaga
aatggagagctgattgttcattctgaaaaaagtgtgaaaaccaccactttttctcccaaa
atatcttctggcccttgcactgagtgctcctgttcttctggaaaagcaactgatagagat
gctagtaacacaaagaagaaggaaaatggagatcggtcattcattcccaaaatatttttt
ggaacacgaacacacaagcaaatatcccagattaccagagagttgaagagaacagcgtat
tccagtgtccctatgacaattctttccagccgggattatacctgtattcatccagtggtg
tctagtagtggtactaacaggaacgaaatgtgtgtggaattgctggaaggaaaacatggc
aagtcctgtctctactatcatggtgttcataaactcagtgaacaccatgcactacagtct
gcacatagggtgtatcaggcttgggacatcgaagatctagtgagcctgggcaggaagctt
cgtgcctgtgcatattttgcagccagagagctcatggtgggcgcagatattgtattttgt
ccttacaattatctcctagacccgcagatacgggagagcatggacattaacctaaaaggc
caagtagtgattttagatgaagcccataatattgaggactgtgctcgggagtcagtgagc
tatggcgttacagaaagtcaactcagagctgctcgagaagagctagatttcatggtcaat
aacaacatcaggcagaaggatcacgcgcccctacgggctgtgtgctgctctttgataaac
tggttaaaggagagctctagtcaactagtagaaagaagctatgaaacttcctgtaaggtt
tggagtggaaaagaaatgctccccattttgcacgaaatgggaataactggtattgctttt
cccgttttacagaaacatcttgctactgtcctggaaaaagaagaaaaagtatcagtgctg
ggtagagaagaacttattgagataccagttgtcagccctgccactcagattatgctgaga
gggttattcatggttctttcctgtctctttaaagataagaacaggtatgcagatgactac
agagttgctttacaacaaacctatgcttggatgaatgaaaacgaatctgatgtttcagat
gcaagtgccttctttacaaggcccaagcgtaaaaggaatttgcggcagaaaaccgtagtc
cacatgctgaatttttggtgcttgaatcctgctgtggcattttcagacttaagtgatgtt
agaacaattgttctgacctctggtacgctctctccaatggattcattttcttcagagctt
ggcgtgaagttttccattcagttggaggcaaatcacattattcggaactcgcaggtttgg
gttggcaccgttggagcaggccctaatggtcggaagctgtgtgccacattccagcacacg
gagacctttgagttccaggatgaggtgggagcacttctgctttcagtgtgccagacggtt
ggccaaggaattctgtgctttttgccatcttataagctgttggacaaattgaaagatcgc
tggatgcacactggcttatggagaaacctggagctggttaagacagtcattgcagagcct
caaggagggacaaagagtgactttgatgaactgcttaaaatatactatgatgcaataaaa
tttaaaggagaaagagatggagcactccttatagctgtatgcagaggaaaagtcagtgaa
ggcttggatttctgcgatgagaatgcccgtgcagttataaccataggtattccatttccc
aacgtgaaagaccttcaggttgaattaaagaggaagtacaatgaccagcacaaaaacaca
agaggccttttaccagggagtcagtggtatgaaattcaagcttatagagctctgaaccaa
gccctgggaaggtgtataagacataggaatgactggggtgctcttattttagttgatgac
cgcttccggaataaccctaataagtacataactggattatctaaatggattcgtcagcaa
atccagcaccatgaaaattttggtagtgcacttgaatccttgcattcatttgctagaaga
aaccagaaaggcattgattattcatcagagtgcggcagtgaacttctccatgtaccttca
acttcaaaagacctgtcacaagcctctcaacaggagtcaactattcatctgtcgccaggt
gttcctgctaaaagtgaggagcaaaatttggtttcagaaattaattttgctacaactttc
agctcagttaatcctacagcatcaaatcagccaagtggccagaaagttgatgtaaagagt
cattctcaccatgtaacacaaagaagaaaacatatggactccacacccaaaatgccacca
actgaaacagagagagaaaaaaagaatgatgggactgattctgttattatgaaagaacat
tgctgccttaaacaactgacttcaacacctttgcctgtagccaagaactacgtgtccaca
gctagtggcaaacaaaagaatgcgaacagggctagtgaacttattgatagtgtaaatcaa
tgccagtcatcattaacttcagaacataaaccaagcgtaccagaatcacatttggaaaca
actaattttttggttacaaatactgaggcttcagttgaagctgtgactcatcagactgct
cttcaaatcgagccctgcactgagtttcctgcagcagaagggaaatctgaactttcaatg
ttaaatgtatctgcagaagctgaggatgaggatgagagtatctacttcacacctgaactc
tatgatgatgtagaatcagaggaacaggaaatcagaccacaggttccgacctgtaataca
aatgagaatcggactgaatgtggaaactccacagtcactgatgatcattttgcagtcaac
atctcagaaacaccaggtgtgactgaaaaaaaaattgatgatgatggaaacacaagttta
catggaataatgcaaaacgaggggagtaaggatagtgcagttaataatgtagagaggact
agtgaaatagaagcagagcagataacatctcaagagatggacaccaaaaaacggaagatc
agtctttccagatcacgaaataaaggtgtgtcatcttttctgttgagcagttctagcccc
tag
DBGET
integrated database retrieval system
