Tauraco erythrolophus (red-crested turaco): 104378796
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Entry
104378796 CDS
T08611
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo04510
Focal adhesion
teo04512
ECM-receptor interaction
teo04518
Integrin signaling
teo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104378796
04518 Integrin signaling
104378796
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104378796
09142 Cell motility
04820 Cytoskeleton in muscle cells
104378796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
teo04147
]
104378796
00536 Glycosaminoglycan binding proteins [BR:
teo00536
]
104378796
Exosome [BR:
teo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104378796
Glycosaminoglycan binding proteins [BR:
teo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104378796
Hyaluronan
Extracellular matrix or blood plasma proteins
104378796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
YBD
Motif
Other DBs
NCBI-GeneID:
104378796
NCBI-ProteinID:
XP_009984205
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
MDDWKPLLVLLFVSTFCSTDAQQTACRKATLAGVVFFSRYSTSIGQENFQKVKNFVSTSV
LSLYVGLDASXVGLAQYSDETYQEFFLNKYLKSDVLEQIENLPYRSGEAYTGKALDFVNT
VYFTEPAGSKAKGYVLQVAMLITGGESSDEVELPARKLRNRGISRYVVGTVVQNTNELQQ
LASKPFGKYLYSAGNFDDLPDFSVRLWGNFCFASESEIKAFAKQYADVIFFDSTENMNLS
TFGKVKHFISQIVRQPNNYRIGLVQFSGIGQVEFXLNTQENEEKMLDHIQHSIAFSQENF
FMDSAGSWLSEGTPQVVVVIKPSGSRDSIMEAAWMLQGAEEKVRATSSMTSQSYEGESID
LLQQNIVSDMEASLQKLYDLDPSVPAACSSATVADIVFDFDSKLCLVMTLPADCDIDLSI
AIDISRHVRPASTVLLKQKLQAFLPKLLLQMKSLPNTSCNASSPVNIRFKFQVLAQTKQF
IFDSDFEDYNEEIIQNFLDAQTTVDTYLDADFLQAIEEKFFSVTSAKVKVLLVFSDGLDD
SLEDLRKAADSLHFKGLDALLLVGLDNTQNLTELREIEFGRGFGYNEPLSVGFADIANIL
QRNFDTVAERKCCKVVCKCLGENGDRGGQGSPGRKGSTGYRGSPGHPGEEGGIGERGPAG
FNGTQGDRGCPGARGHKGARGYRGTQGEYGESGLDGTDGEQGEHGFPGPSGEKGSMGKRG
RKGPRGEPGERGESGLRGDHGDPGTSNNVPGPKGEKGKLARQGDPGPHGLQGEQGDAGPD
GATGRRGPPGTKGEQGDLGEAGYPGDSGLPGPQGPRGLQGIRGPPGPQGMPGPLASLGAP
GSPGSVGKLGARGAKGEPGDPGEKGPVGPAGQRGMPGMDGRDAYGPEGSKGAKGESGFIG
YPGPEGEDGDPGVPGAEGPKGVRGRRGNAGTPGSLGDPGDQGPSGPMGAKGPMGTILMEP
CELVNFTRKNCPCSSDTCPVYPTEVVFAFDMSEDVTPAAFERMRNIVMLLLKTVKISESN
CPTGARVSVVSFNTNTRYLIRFSEFQKSNLLLQAVQRIPLERSTGKRNIGAAMRFVARNV
FKRVRQGILTRKVALFFANGPSQNDVAISTAVLELSALDITPVVIAFNEVPNVRRAFLID
DTRRFQLFVWERQQDESLESITYCTLCFDKCKPSTYCEVPFSPPVLMDMDITYIIDSSRS
ISSEEFQRAKDFVSNMLDQFVVSSQPNESYGGIRVALVQQAPRGFLPDRNQTPVALEFDL
VTYSNKDLMKKHIEESVHQLEGPSAIASALQWTVENVFFKAPQQRKHRIIFAIVGSKTST
WDREKLREISLGAKCQGFTLFTLALGNDVSDNELMELSSSPTDQHLLTLGRVSTSEVVYA
QRFSRAFLNLLQQEMNSYPSPELQEECENLDQGDTQQQVSMIERVPFPGTDETGYGHGLE
DIERTESRVLKNIRDSTTEPVYTMPEMRYDYEENAYFTEEDAEGEKPQEYGEAQEKNEES
LEATVESRAAYSDYDACDLVQDSGECQNYLLKWYYDKEQKMCGQFWYGGCGGNKNRFETQ
EECRFLCIESS
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggatgactggaaaccacttcttgttcttctctttgtttccaccttctgctctacagat
gcacagcagactgcctgcagaaaagccacgttggcaggtgttgttttttttagtagatat
tcaacaagtattggccaggaaaacttccagaaggtgaagaacttcgtctctacctcagtt
ttaagtctttatgttggtctcgatgccagctgagttgggctggcacaatacagtgatgag
acttaccaagaattcttcctgaataagtatttgaaaagtgatgttttggagcagattgag
aatttgccatataggagtggagaagcttacacagggaaagctctggattttgtcaacaca
gtgtatttcactgaacctgctggtagcaaagctaagggctatgtcctgcaggtagccatg
ctaatcactggtggagaatcaagtgatgaagttgaattgcctgccaggaaactgaggaac
agaggcatctcccggtatgtcgttggaactgttgtccagaatacaaatgagcttcagcaa
ctagccagcaaaccttttggtaaatatctgtatagcgctggtaattttgatgaccttcca
gatttttccgtaagactttggggaaacttttgttttgcaagtgaaagtgagataaaagca
tttgcgaaacaatatgctgatgttattttctttgactccactgagaacatgaacctttca
acctttgggaaagtaaaacatttcatctcccagatagtcagacagcctaacaactatagg
attggcctagtccaatttagtggcatagggcaggtggagttttaactgaacacacaagaa
aatgaagaaaagatgcttgaccacattcagcacagcattgcgttttcgcaggaaaacttt
ttcatggatagtgctggaagctggctcagtgaaggcactccacaggttgtagtggtcatc
aaaccctctggatccagagacagtatcatggaggcagcctggatgttacaaggggcagaa
gaaaaggtgagagccacctctagcatgacttcccagagttatgaaggagagagcatcgac
cttctccagcaaaacattgtcagtgatatggaagcctcacttcagaagctttatgatctt
gacccaagtgtgccagcagcgtgttccagtgcaactgttgcagatattgtgtttgacttt
gattccaagctctgtcttgttatgactctgccagctgattgtgacatagatctttctata
gcaattgatatttcaaggcacgtgcggccagcatccacagtgcttctgaaacagaaattg
caagcattcctccccaagcttttactccagatgaaatcacttccaaataccagctgtaac
gctagctctccagtcaacattagattcaagttccaagtattggcacagactaaacaattc
atctttgactctgattttgaagactataatgaagagatcatccagaatttcttagacgca
caaaccactgtggacacctacctggatgcagacttcttacaggcaattgaggagaagttc
ttcagtgtgacctctgctaaagtgaaggtgctgttagtattttcagatgggctggatgat
tcactggaagatctcagaaaagcagctgactcccttcactttaaaggtcttgatgcactt
ctattagttggcctggataatacacagaacttgactgaacttcgggaaatagagtttggc
agagggtttggatacaacgaacctctgagtgttgggtttgcagacattgcaaacatcttg
cagagaaactttgatactgttgcagaaaggaaatgctgtaaagttgtttgtaaatgcctt
ggagaaaatggtgatcgcggtggccagggaagtcctggaaggaagggaagcacgggttac
agaggatctcctggccatcctggtgaagaaggtgggattggggagagaggcccagctggt
ttcaatgggactcaaggagacaggggatgtccaggtgccagaggccataagggggccaga
ggctatagaggaactcagggtgaatatggtgaaagtggacttgatggcactgatggagag
cagggagaacatggatttcctggaccttctggagaaaaaggcagcatgggaaagcggggc
agaaaaggccccagaggagaaccaggtgaacgaggagaatctggtctaagaggagatcat
ggagatcctggaactagcaataatgttcctggtcctaagggtgaaaagggaaagctagca
cggcagggagacccaggaccacatggactccaaggagagcagggtgatgctggccctgat
ggtgcaacaggtcgaagaggccctccaggcacaaagggtgagcaaggagatctgggggaa
gcaggttacccaggagactctggtcttccaggcccacagggcccaagaggactacaaggg
atcagaggacctccaggaccacaaggcatgccaggccctttggctagtctgggggcccca
ggttcacctggctctgtggggaaattaggcgcaagaggagcaaagggtgaacctggtgac
cctggagagaagggcccagtgggaccagctggacagagaggcatgcctggtatggatggc
agagatgcatacggtcctgaaggaagcaaaggagcaaagggagaatctggattcatagga
tatcctggtccagagggagaagatggagacccaggcgttccaggagctgaaggacccaaa
ggagttaggggtagaagaggtaatgctggcacaccaggttctctgggagatccaggggac
caagggccatcaggacctatgggtgccaagggaccaatgggcaccattttaatggaacct
tgtgaactagtgaattttacacgaaaaaactgtccttgctcatcagacacatgtccagtt
tatccaactgaagtggtgtttgccttcgatatgtctgaagatgttacgccagctgcattt
gaaagaatgaggaacattgttatgttattgctgaagactgttaagattagtgaaagcaat
tgcccaacaggcgctcgtgtctccgttgtttctttcaataccaatacgcgctatctcatc
cgattctcagaattccaaaaaagcaacttgctgctacaagctgtccaaagaataccacta
gagaggtccactggaaaacgtaatattggagcagccatgagatttgttgcaagaaatgtc
ttcaaacgtgttcgtcagggcatcctcacaaggaaagttgccctattttttgccaatggt
ccatcacagaacgatgttgccatcagcacagctgtacttgagttaagtgccttggacatc
actccagtggttattgccttcaatgaagtgccaaatgtcagacgtgccttcttgattgat
gatactagaagatttcagttatttgtttgggaaagacaacaggatgaaagtttggagagc
atcacatattgtacactttgctttgataaatgcaaaccaagtacctactgtgaggtgcct
ttttctcctcctgttctgatggatatggatatcacttacatcatagacagctctcgcagc
atcagcagtgaagagtttcagagagccaaagactttgtaagcaacatgctagatcagttt
gttgtttcctcacagccaaacgaatcgtatggaggcatcagagtggcactggtgcagcag
gctcccaggggcttcctgcctgacagaaaccagacccctgtggccttggagtttgatcta
gtcacatacagcaataaagatttgatgaagaagcatatcgaagagtctgttcaccaactg
gaagggccatcagccattgcttctgccctacagtggacagttgaaaatgtattctttaaa
gccccccaacaaagaaaacacaggatcatatttgcaatagttggaagcaaaacaagcacg
tgggacagagagaagctgagagagatttcactcggagccaagtgtcaaggtttcaccttg
ttcactcttgcgcttggcaatgatgtgagtgacaatgagctgatggagctgtcaagctcc
cccacagaccagcacttactgacactgggcagggtttcaacatctgaggtggtatatgct
cagaggtttagccgggcgtttctaaatcttctgcaacaagaaatgaacagttatccttca
cctgaacttcaagaagagtgtgaaaacttagatcagggagacacacaacagcaagtgtct
atgattgaaagggtgccttttcctggaactgatgaaactggttatggtcatggtttagaa
gacattgaaagaactgaaagtagagtcctgaagaatattagagattccaccacagaacct
gtatatacaatgccagaaatgagatatgattatgaggagaatgcgtatttcacagaggaa
gatgctgaaggagaaaagccacaagagtatggtgaagctcaggagaagaacgaggaaagc
ttagaggcaacagtagaaagtagagctgcctatagcgattatgatgcatgtgaccttgtt
caagatagtggagaatgtcagaattaccttctgaagtggtactacgacaaagagcagaaa
atgtgtggtcagttctggtatgggggctgtggtggcaataaaaacagatttgaaacgcaa
gaagaatgtagattcttgtgtatagagtcttcctag
DBGET
integrated database retrieval system
