Tauraco erythrolophus (red-crested turaco): 104378895
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Entry
104378895 CDS
T08611
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo04510
Focal adhesion
teo04512
ECM-receptor interaction
teo04518
Integrin signaling
teo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104378895 (COL6A3)
04518 Integrin signaling
104378895 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104378895 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104378895 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
teo04147
]
104378895 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
teo00536
]
104378895 (COL6A3)
Exosome [BR:
teo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104378895 (COL6A3)
Glycosaminoglycan binding proteins [BR:
teo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104378895 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
104378895 (COL6A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
fn3
Motif
Other DBs
NCBI-GeneID:
104378895
NCBI-ProteinID:
XP_009984340
LinkDB
All DBs
Position
Unknown
AA seq
2361 aa
AA seq
DB search
QVTKRDIIFLLDGSLNVGNANFPFVRDFVATLVNYLDVGSDKIRVGLVQFSDTPKTEFFL
YSYQTKSDIIQRMGQLRPKGGSVLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVTAG
RSADPFLQVSNELARAGVLTFAVGVRSADKAELEQIAFNPRMVYFMDDFSALAALPQELN
KPITTYVSGGVEEVPLAPTESKKDILFLIDGSANLLGSFPAVRDFVHKVISDLNVGPDAT
RVAVAQFSDTIQVEFDFAELPSKQDMLLKVKRMRIKTGKQLNIGAALDEAIRRLFVKEAG
SRIEEGVPQFLVLLAAGRSSDDVEQPSDALKQAGVVTFAIKAKSADSVELERIVYAPQFI
LTVDSLTRISELQPNIVNLLKTIELQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVQ
RVVESLDIGRDKVRVAVAQYSNVIQPEFLLDTHEDKADLISAIQELKVMGGSPLNTGAAL
DYLIKNVFTVSSGSRIAEGVPQFLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADI
TELQTISFLPDFAISVPDFSQLDTVQQVVSNRVIRLTKKEIESLAPDLVFTSPSPAGVKR
DVVFMVDGSRYAAQEFYLIRDLIERIVNNLDVGFDTTRISVVQFSEHPRVEFLLNAHSTK
DEVQSAVRRLRPQGGQQVNVGEALEFVAKTIFTRPSGSRIEEGVPQFLVILSSRKSDDDL
EYPSLQVKQVGVAPMVVAKNVEPEEMVQISLSPDYVFQVSSFQELPSLEQKLLTPIETLT
ADQIRRLLGDVQPPTDVTGDEKDVVFLIDSSDSVRSDGLAHIRDFISRIVQQLEVGPNKV
RIGVVQFSNNVFPEFYLKTHKSKNAILQAIRRLRLRGGSPVNAGKALDYVVKNYFIKSNV
DRGQLQVITNDPERVFVVQDFTGLQTLEKNVQSILEELPIPTTEIPGIPGPGAKKQADIV
FLLDGSINLGRDNFQEVLQFVYSVVDAIYRDGDSIQVGLAQYNSDVTDEFFLKDYSTKPQ
ILDAINKVIYKGGRVANTGSAIKHIQAKHFVKEAGSRIDQRVPQIAFIVTGGRSSDDGPS
ASLEIAQKGVKVFAVGVKNIDLKDVSLLASESATSFRASTAQELSELNEQVLVTLEAAME
ERLCPVTTEILRDCDLDVILGFDVTDVGPGQSIFNSQRGLESRVESVLNRITQMQKISCT
GNQAPNVRVAIMAQARGGPVEGLDFSEYQPELFERFQGMRTRGPYFLTADTLRSYLNKFR
SAPSGSTKVIIHFTDGADDSIDQLEATSSELHIEGVNALIFVGLDRVSNFDQVMQLEFGR
GFTYNRPLRVNLLDLDFELAEQLDNIAERTCCKVPCKCSGQRGDRGVPGPIGPKGATGDL
GYGGYPGDEGGPGERGPPGANGTQGFQGCPGHRGTKGSRGFPGEKGELGEMGLDGIDGEE
GDKGLPGSSGEKGYTGRRGDKGVKGERGERGDRGLRGDPGDSGADNTQRGTRGQKGEIGP
MGEPGPAGVDGQDGGVGRKGMAGRRGPIGIKGTKGSPGQAGPAGEQGMRGPQGPPGQLGT
PGLRGEQGMPGPRAGGGPPGVPGERGRIGPLGRKGEPGNPGPKGPNGQQGPRGEMGDDGR
DGIGGPGPKGRKGERGFIGYPGPKGGPGDRGGAGGPGPRGNRGRRGNAGDPGTPGQKGEV
GYPGPSGLKGDKGESRDQCALVRNIKDKCPCCYGPKECPVFPTELAFAIDTSSGVVTGVF
NRMKQTVLRVVNNLTIAESNCPRGARVALVTYNNEVTTEIRFADARKKSGLLQQIQNFQA
TLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFFSNGDTRASPQLNDAVLKLYDAGV
MPVFLTSRQDPVLTRALEINNTAVGHAIVLPASGSQLNETIRRLLTCHICLDVCDPDPAC
GFGSQRPVFRDRRAAPTDVDTDIAFIMDSSESTTPLQFNEMKKYISHLISNLEISSEPKV
SQHHARVAVLQQAPYEYETNSSFPPVKTEFSLTDYGSKEKIMNYLHNQMTQLHGTRAIGS
AIEHTVAHIFESAPNPRDLKVIVLMMTGKVNKQELEYLQKVVINAKCKGYFFVVLGIGRK
VNVKNIYSLASEPNDVFFKLVDKPGELHEEPLLRFGRLLPSFIRSDFAFYLSPEIRKQCE
WFQSDQQAKSQSPGHTGQKAVYVAPNVTISRTLSASTTVSTSAKPVASTNARARTTTAST
TAQTRTTDQTTASTVVQVNTTTQSAASTTTHAKATGRTTASTTAATAGGRRRQGAKSHDI
QISDVTENSARLRWASPEPHNAYAFDITVTLAHDHSLVQKQNLTGTEHVIRGLRSGQKYL
VVITGYQKSQPKVTYTGTFST
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
ttcaagtaaccaaaagggatatcatctttcttttggatggatcactcaacgtcggaaatg
ccaacttcccctttgtgcgtgactttgttgccaccctagttaactaccttgatgtcggca
gtgacaaaatccgagttggcttagtgcaatttagcgacactcctaaaaccgagttctttc
tgtactcgtaccaaaccaaatcagacataattcaacgtatggggcagctgaggcccaagg
gagggtcagtgttgaacaccggctctgcactgaactttgtgctttcgaatcacttcacgg
aagctggtgggagcagaataaatgaacaagtgccgcaggtcctagtcctggtgacggcag
ggaggtctgccgatcccttcttgcaagtttccaatgaattagctcgggccggagtgctga
cttttgctgttggagttaggagtgcggataaggcagaacttgaacagattgcctttaatc
caagaatggtatattttatggatgatttcagtgctctggcagctttaccccaggagttaa
ataagcctataacaacatatgttagtggaggtgtggaagaggttccactcgccccaacag
aaagcaagaaagatattttattcctgattgatggctcagccaacctcttgggtagctttc
ctgccgtccgggactttgtacacaaagtcatttctgacctgaacgtgggtcctgatgcca
cacgagtagctgtagctcaattcagtgacacaatccaagttgaatttgactttgccgaac
tcccatctaagcaagacatgcttctcaaagtgaaaaggatgaggataaaaactgggaagc
aactgaatattggagctgcgctagatgaagcgataaggaggctgtttgtgaaggaagctg
gaagcaggatcgaagaaggagttcctcagtttttggtcctccttgctgctgggagatcat
ccgatgacgtggagcaaccgtcagatgctctgaagcaagctggagttgtgacctttgcta
tcaaagccaaaagtgccgactctgtagagctggaaaggatcgtttatgccccacaattca
ttctgaccgtcgactccctcactcgtatttcagagcttcagccaaacatagtcaacctgt
tgaaaactatcgagcttcagccaacagtagttgagagaggtgagaagaaggatgtggtgt
ttctaatcgatggctcagatggtgttagaagaggtttccctctactgaagacctttgttc
aaagagttgttgaaagcctggatattggtcgtgacaaggtccgtgttgccgtcgcgcagt
acagcaatgttatacaacccgagttcttactcgacacccacgaagacaaagcagatctca
tcagtgccatccaggagctgaaagttatgggaggatctcctctgaacaccggagcagccc
tcgactatctcatcaagaacgtcttcacggtgtcaagcggtagcaggatagcagagggcg
tcccgcagttcctgattctgctgactgctgatcggtcccaggatgacgtgaggaggccct
cggtggtcctgaagacgagtggaacagtgccctttggcatagggattggaaatgctgaca
tcacagagctgcagacgatctccttcctcccggatttcgctatctctgtgcctgacttca
gccagctggatacagtgcagcaggtcgtctcgaacagagtcatccggctgaccaagaaag
agatagagtcacttgcccctgatctggtttttacatcacccagcccagcgggtgtgaaaa
gggacgttgtgttcatggttgatggctcccgctatgccgcccaggagttctacctcatcc
gtgatctcattgagaggatagtgaacaacttggacgtgggctttgacaccacccggattt
cagtggtccagttcagcgagcatccccgcgtggagttcctgctcaacgcccactccacca
aggatgaggtgcagagcgctgtgagacggctgcggccacagggtggccagcaggtgaacg
ttggggaggctcttgagtttgtggcgaagaccatcttcacccggccctccgggagccgca
tagaggaaggcgtccctcagtttttggtcatcctctcctcccgcaagtccgacgatgact
tagagtacccatcactccaagtcaaacaagtgggggtggcacctatggtggtagcaaaga
acgtggaacctgaggagatggtacagatttctcttagtcctgattatgtattccaagtct
ccagcttccaagaactgcctagcctcgagcagaagcttctgactcctattgaaaccctga
ccgcggaccaaatcagaaggctgctgggagacgtgcaaccccccacagatgttactggtg
atgaaaaggacgtagtcttccttattgacagctctgacagcgttaggtccgatgggcttg
ctcacattcgggatttcatcagcagaattgttcagcagctggaagtggggccaaacaaag
tgcgaatcggtgtggtgcagttcagcaataatgtcttccctgagttctacctgaagaccc
acaagtccaaaaatgccatcctgcaagccatccgccgcttaaggcttagagggggctccc
ccgtgaatgccggcaaagccctagactacgtggtgaagaactactttatcaagtctaacg
tggacaggggccagctgcaggtcatcaccaacgatcctgagcgtgtgtttgtggtacagg
actttacaggactccaaactttagaaaagaacgtgcagagcattcttgaagagcttccga
tacctacaacagaaatccctggaattccaggacctggagctaaaaagcaggctgacattg
tgtttttgctggatggctcgatcaatctcgggagggataacttccaagaagttctccagt
ttgtctactctgtggtggatgccatttatagggatggtgactctatccaggtaggactgg
cccagtacaactcagatgtcactgatgagtttttcctcaaggactactccaccaaacctc
agattttagatgccatcaataaagtcatctacaaaggtggccgagtggcaaacactggct
cagctatcaagcatatccaggcgaaacactttgtgaaggaggctggcagccgaattgacc
agagggtgccccagatcgccttcatcgtcacaggtgggaggtcctctgatgacgggccga
gtgcctccttggaaatcgcacagaaaggcgtcaaggtgtttgcggttggcgtgaaaaaca
tcgacctgaaggacgtcagccttctggccagcgagagcgccacaagtttcagagcatcca
cagcccaggagctgtcagagctgaatgagcaggtcctggttacgctggaagccgctatgg
aggagagattgtgcccagtaacgacggaaattttaagagactgtgacttagacgtgatac
tcggctttgatgtcacggatgttgggcctggccaaagcatattcaattcccagagaggtc
tggagtccagagttgagtctgtgctgaacagaataacgcagatgcagaagatcagctgca
ctggcaaccaggcgcccaacgtcagggtggccatcatggcccaggctcgggggggacccg
tggagggactggacttctccgagtaccagcctgagctcttcgagaggtttcaaggcatgc
gtacccgcgggccctattttctcacggcggatacgctgaggtcctacctgaacaaattca
gatctgcaccctccggcagcaccaaggtcataatccattttactgacggtgcagatgact
cgatagatcagctggaggctacttcgtctgaattgcatatagaaggtgtcaacgctctca
tcttcgtcgggctggaccgagtgagcaatttcgaccaagtgatgcagttggagtttggtc
gtgggttcacctacaacagaccgctcagagttaatctgctggacttggatttcgagctgg
cagagcagctcgacaacatcgcagagaggacgtgctgcaaggtcccatgcaagtgctcgg
ggcagagaggggacagaggtgtgccgggccccataggaccaaagggtgccacgggtgatc
ttggctatggaggctatcctggtgacgaaggaggaccgggtgagcgtggaccaccgggcg
cgaacgggacgcagggtttccagggatgccccgggcacagaggaaccaagggttctcggg
gattcccaggagagaagggtgaactgggagaaatgggtctggatggcattgatggagaag
agggagacaagggtttgcccggctcctctggagagaagggatacactggcaggaggggtg
ataagggagttaaaggtgaacgaggagaacgaggtgatcgtgggctccgtggagacccgg
gagattcaggagctgataatactcaaaggggaaccagaggccaaaagggtgaaattggac
caatgggagagccaggaccggcgggtgtggatggccaagacggtggagttgggaggaagg
gtatggcaggacgaaggggaccgataggcattaagggtaccaagggctcacccggacagg
cggggccggctggagaacaaggcatgagagggccacagggtccgcccggccagcttggca
caccaggcttaagaggagagcagggcatgcctggacccagggctggtggtggaccaccag
gagttccaggagagcggggcaggatcggtcccctaggacgaaagggtgagcctggaaacc
ctggacccaaagggccaaatggacagcagggcccacgaggagagatgggtgacgatggac
gagatggaattggtggcccaggccctaaaggcaggaagggagaacgtggcttcataggct
acccagggcccaagggtggacctggtgaccgtggtggtgctggaggccctggccctagag
gaaacagaggccgcagaggaaatgcaggagatcctgggacacctggtcagaaaggagagg
ttggataccctggaccatctggacttaaaggtgataaaggagaatccagagatcaatgtg
cacttgtgcggaacatcaaagacaaatgcccttgctgctatggtcccaaggagtgtccag
tcttcccgaccgagctggccttcgctatcgacacctcctcgggcgtcgtgacgggtgttt
tcaacaggatgaagcaaactgtgctcagagtggtcaacaacttaaccatcgctgagagca
actgtcctcggggtgcccgggtggctctggtcacctacaacaacgaggtcaccacagaga
tccgctttgctgacgccaggaagaaatcaggcctcctccagcagatccaaaacttccagg
cgaccctaacgacaaagccacgcagcctagagacagccatgtccttcgtggccaggaata
ccttcaagcgtgcccgaagtggcttccttatgaggaaggtggctgtctttttcagcaacg
gggacacgagagcctccccacagctcaatgatgccgtgctgaaactctacgatgctgggg
ttatgcctgtgttcctcaccagccggcaggacccggttctcaccagagctctggagatca
acaacacagcggttggacacgcaattgttcttccagccagtggcagtcagctgaatgaaa
ctatccggaggctcttgacttgtcacatttgtttggatgtgtgtgatcctgatcctgcct
gtggttttggtagtcagagacctgtattcagagacagaagggcagccccaacagatgtag
acactgacattgccttcatcatggatagctcggagtccaccacccctctgcagttcaatg
agatgaagaagtacatttcccacctcataagtaacctggaaatcagctctgagccaaaag
tatctcagcaccacgcaagagtggcagttctccagcaagctccttatgaatatgaaacca
actcaagcttcccgccagtaaaaactgagttttcactaactgattatggatccaaagaga
agattatgaattaccttcacaaccaaatgacccagctccatggcacaagggctataggaa
gtgcaattgaacatacagtggctcacatttttgaaagtgcaccaaaccctcgggatctaa
aagtcatcgttctgatgatgaccggaaaagtgaataaacaagaacttgaatacctgcaga
aagttgttatcaatgcaaaatgcaaagggtacttctttgttgtcttgggcattggcagga
aggtgaacgtcaagaatatctatagcctagctagcgagccaaacgacgtgttcttcaaat
tggtcgataaaccaggagagcttcatgaagagcccttgctacgctttgggagattgttgc
catcttttatcagaagtgactttgctttctacctgtctccagagataaggaaacagtgtg
agtggttccagagtgatcagcaagccaagagccagagccctgggcacactgggcagaaag
cagtgtacgtggcacccaacgtgaccataagccggaccctcagtgccagcaccacggtca
gtacgagcgccaagcctgttgcgagcaccaacgcccgtgccagaaccaccactgccagca
ccacggcccagaccagaaccaccgaccagaccacagccagcaccgtggtccaggtgaaca
ccaccacgcagagcgcagcaagcaccaccacccacgccaaagccaccggtcgcaccaccg
cgagcaccacggccgccacggcaggtggcaggagaagacaaggcgccaagagccacgaca
tccagatctcagacgtgacggagaacagtgccaggctgcgctgggccagccccgagccac
acaacgcctacgcttttgatatcaccgtcaccttggcgcacgaccactctctcgtgcaga
agcaaaacctgaccggcaccgagcacgtcatccgaggactcagaagcggacagaaatacc
tcgtcgtcatcaccggctaccagaaatcccaacccaaagtgacctacacagggacattca
gcacaa
DBGET
integrated database retrieval system
