Tauraco erythrolophus (red-crested turaco): 104379221
Help
Entry
104379221 CDS
T08611
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
teo04131
]
104379221 (VPS13A)
Membrane trafficking [BR:
teo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104379221 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
104379221
NCBI-ProteinID:
XP_009984743
LinkDB
All DBs
Position
Unknown
AA seq
3129 aa
AA seq
DB search
FYLRVFLLLGAVALKNLEIKENALSQLDVPFKVKAGHIGQLNLQIPWQNLYTQPVEAVLD
GVYLLIVPTASIKYDAEKEARQLLEARQRELQRIEEAKQKIADQDKVKEEKQDTFVEKLV
TQVIKNLQVKISNIHIRYEDDITNRNNPLSFGVSLQNLSLQTSDKNWNPCLHDETAKLFY
KLVRLDNLFAYWNVKSEMFYHGGCDESLVNLKQGVASHNVIPEGYDFVFRPISARAKLLM
NPRSDVDFSSPKMDLDVNLQDITVEFNKPQYFSVMELLESIDMMTRNLPYRKYRPDVPLH
NNAKTWWKYVIYGILEVNVQPKLQMWSWEHIRHHRKQVKNYKEMYKTKITSKKPNEDILK
LLEEFEKALDIFNITLARQQAEVEATKAGLKIYRPGVKQDDENSGGWFSWIWSWSSEKKD
EQKQEVKGSSLEELMTPEEKAKLYAAIGYSETAVDPTLPKSYEAMKFSVKLLSMSISLRE
NKHTPELVEFALSGLSTVFTQRPGAQAIRFETEIASLEVTGMSQEKCMPCLLSSRTVYSD
ESTSLLSIMFETNPLDEKADQRLRIESQPLEIVYDAMTLNSLVDFFRPPKDVHLEQLTSA
TLMKLEEFREKTSTGLLYVIETQKVLDLKINLMASYIIVPQKGFYDRTSNLLLLDLGSLK
MKSKSRSDLSELKVGQSTIEDIMSRAYDSFDIQLSSIQLLYSKHDENWQEARKLKYSSQH
ILQPLDVNVEFSRAMVVTDARMPKFKLSGQLPLLSIQISDQKLTSILELIDSIPKPESAP
ATSSPPKITEAAISPVLSAAHLSQGAFPVLDLHSFAESESEEEFYDALSSPVEDMPFFEA
PTGSLKRASSMRRKKLRKQESLKNMTEFQLRFEVAEVLIKLCRLTDNTETPVLQLDVVGL
GTELKLKTFDMTASAFLREVCLLCPEYMDDNDMPVYIITTLDNVEDDLLTLEYIKADING
PELKTTYQNVLQKIKVNFSSLDVHLHTEALLNAMNYLNNLLPKQETKVAEEAVHEKIEEK
KDVLKKLTSKKSKYEDVIDLNICADLSCLRIFIREKKHRIAEIHIEGLDSQVIMKKAATE
VTAKLKNIVIVDSDEMALYKKALYITGKEVFNFRMISYVNATDGIAYTNMDVVDNRVYLT
VGCIQVVFVNKFVSSILAFINNFQAAKEALTEATVQAAEKAATGVKELAERSSRLALDIN
IKAPVVIIPQSAMSANVLVADLGLITVKNQFFIAKTKTRYNLPPVVDSMTVKLSELKLYR
SCYEPGSLQTEVQLLQPLNLEVAVERNLAAAWYNEVPDIEISGRLKPMNLILSQEDITTI
LRTLNENIGGSSGSSASLPEPKDTTSHSSDMHNTSQHSAGVTVVTSAVVELHSPMKIKTT
LKLDFRFDSLTLVLYSPNSKQVTNLDQRDDLLKLAEFKLVLMSAAVKMLSDGSMNASVKL
ANCTLDDKRQSIQKATPRMVEMKHGYEKKVMVDINYKQGRDGTVLDVIVQEIYLCASMEF
LLTVADIFLKANAESAAAQRNLKQSLPLKEQATVQPVSTMEMNIVVKNPEIVFVADLTRS
DAPALVVTTQCEVFIKNSPERYSMTAAVKEIQMKACPFLPEKRKGNITTVLQPCDLFFEM
KQSGTNPQTADLTIKSLTIKVSPIIINTVITITSALYQTAETTEEEISQIPPDLWNKKDI
KNLKMWFLEESNENEDTNPTAELVPTGESLKMNVESVLLTLEAGVGHRTVPMLLAKSSFL
GEVKNWSTLINLRSRLELEVHYFNEMFGVWEPLLEPLEVEKTDLFNPWVLEIKMKKKAKK
MLVESDAEEEENYKVPEYKTVINVSSKDQLNITLSKCGLQMLSNLGTAFAEAASQTSDIF
KKDRAPFVIMNSLGLPITVLPSDSFSVLNVEFGAKIFHLRDGENLNMEFLRTNNESDQFT
AMTTLSSKRFYIQICPHNHSTVEKIPLTKVGRCIYRVRHEESGVERSIVCQIDTVEGSKT
ITIRSPIQIRNHFSIPLNIFEEGRCLGTASPENEFNIPLSSYRSILSLQPLANENGVDGE
YDLCEGITFDEIMKNVDSLLQRKCQSVRSTNHSLIINIVPVKDTLTSSLCAEDQWDFPYV
VHLWPSVLLRNLLPYQITYSIEGNGNKYGTLQEGCSAQIHNAVLDQTKLDLQLLNYLDQN
WKSEYHIKSNLPDITFTTFYCITELDKTELDIAVHVTYTTGQMVIAIHSPYWMVNKTGRM
LQYKADGIHRKHPPDYKKPLLFSFQPKNFLQNNKVQLMVTDSELSDQFSLDTVGSHGSVK
CKSHKKEYQVGVTINNSSFNITRIVTFTPFFMISNRSKYTLEVAEEGKEKWIPIVLQQCI
PFWPEDDANKLLVRVENSDLPPKKINFDKQENCLLLHLDNKLGGITVDVNLTEHSTVITF
SNYHDGAAPFLLINHTKEEIIEYGQSSLSELEDCLQPNKAVLYTWADPAGSRKLKWKCGK
RTEEITPKEDKMEILSLDCRKVVYFVSFFEGLQRIVLITEDENVFKLTYESVKAELAEQE
IVLSLQDVGISLVNNYTKQEVSYIGITSSDVVWETKPKKKSRWRPMSVKQTDKLEQEFKE
YSELTPSENKIIELESNVLVCLTPNGMNMKIQQPNEIPIRRNYLPALKVEYSSSAHQKSF
RIQIYRIQIQNQIPGAIFPFVFYPIKPPKSITLDSAPKPFTDVSIVMRTAGHSQISHIKY
FKVLIQEMDLRLDLGFLYALVEFFTQTDVLSDQELELFKKDVESLQEELMSVSSMDTSQI
SLYEYFHISPIKLHLSFSLSTGGEDSNKEERKNELIPLQSLNLLLKGATLTDVQDVVFKL
AFFELSYHFCTTQQLQTAVIRHYSKQAIKQMYVLILGLDVLGNPFGFIRGLSEGVEAFFY
EPYQGAIQGPEEFIEGMALGLKALVGGAVGGLAGAASRITGAMAKGVAAITMDEDYQQKR
REAMNKQPTGLREGITRGGKGLVSGFVSGITGIVTKPIRGAQKEGAAGFFKGVGKGLVGA
VARPTGGIIDMASSTFQGIKKVADSSEDVISLRPPRFFGEDGVIRPYRLRDGTGSQMLQK
IENGRFAKLRYIAHAMVNSTDLLMVTKSGVLFVTKGTFGQLTCEWQYTYDEFTKEPFIVD
GRRLRIEAK
NT seq
9387 nt
NT seq
+upstream
nt +downstream
nt
ttttacttacgggttttcctgcttttaggagctgtagcactgaagaatcttgaaataaaa
gaaaatgccctgagtcagctggatgtgccatttaaagttaaagcaggacacatcggtcaa
cttaacttacagattccatggcaaaacctttatactcaacccgttgaggcagttcttgat
ggagtttatttgcttattgtgcccacagccagcataaaatatgatgcagaaaaagaagcc
aggcagctcttggaagcaagacaaagagaattgcaaaggatagaggaagcaaagcagaaa
atagctgaccaagataaagtaaaagaggagaaacaggacactttcgtagaaaaactagta
actcaggtcatcaaaaatcttcaagtgaaaatttccaacatccatattcgctatgaggat
gatatcacaaatcgaaataaccccttgtcctttggagtttcacttcagaatctaagtttg
cagacctcagataagaattggaatccatgtttacatgatgaaactgccaaattgttctac
aagcttgtacgactggataacctttttgcttactggaatgtgaaatcggagatgttctac
catggtggttgtgatgaatcactggtgaacttaaaacagggagttgccagccacaacgta
atcccagaaggttatgatttcgtattccgcccaatttcggcaagagccaaactccttatg
aatcctcgatctgatgttgacttttcatcaccgaaaatggatttagatgtaaatttacag
gatataactgtggaatttaataagccacagtacttcagtgttatggagcttcttgagtct
attgatatgatgactcgaaatctgccatacaggaaatacagacctgatgttccattgcac
aacaatgccaagacatggtggaagtatgttatctatggcatccttgaagtaaacgttcaa
ccaaagctccaaatgtggtcatgggaacatattcggcaccataggaaacaagtgaagaac
tataaagagatgtataaaacaaagataacatcaaaaaaacctaacgaagacattttgaaa
ttgttggaggaatttgaaaaggccttggatatttttaacatcactctagcaaggcaacaa
gcagaagttgaggcaactaaggctggattaaaaatctacagaccaggagttaaacaagat
gatgaaaactctggtggctggtttagttggatatggagctggtcaagtgaaaaaaaagat
gaacagaaacaagaagtaaagggttcaagtcttgaagagctgatgacacctgaagagaag
gctaaactttatgcagcaattggatatagtgaaacagctgtggatccaacccttccaaaa
tcatacgaagccatgaagttctctgtgaagttattaagcatgtctatatcactgagggaa
aacaagcacactcctgagctggtagaatttgcattatccggcttgagtacagtatttacc
caaagaccaggtgcacaagcaataagatttgaaacagaaattgcttcactcgaagttaca
ggcatgtcccaagagaagtgtatgccctgtctattgtcttctcgaacggtctattcggat
gagagtacttcactcttaagcataatgtttgagaccaatcctttggatgagaaagcagat
cagaggcttagaatagaatcacagccactggaaatagtatatgatgcaatgacattaaat
agcctggtggatttcttcaggcctccaaaagatgtacatttggagcagctgacatcagca
actctgatgaagcttgaagagttccgtgaaaaaacatcaacaggtttgttatatgttatc
gaaacccagaaagttcttgacctcaaaattaacctcatggcttcgtacatcattgttcca
caaaaagggttctatgaccgtacgtcaaatttactgcttctggatcttggtagtcttaag
atgaaaagcaaaagtcgttctgatttatcagaactcaaagtaggacaaagcactattgaa
gatataatgtcacgagcttatgacagttttgatatccagctcagcagtatacagttactg
tacagcaagcatgatgagaactggcaagaggctcggaagctgaaatattcatctcaacat
atcttgcagcctttggatgtaaacgtagaatttagcagggctatggttgttacagatgca
agaatgcccaagttcaaactgtctggacagctacctttactttctatccaaatatctgac
cagaagctgacaagtatcttggagctaattgatagcattcctaaaccagaaagtgctcct
gctaccagttctcctccaaaaataactgaggctgcaatatcccctgtgctctcagcagca
catttatcacaaggtgcgtttcctgttttggatcttcattcattcgctgagtcagaatca
gaagaggaattttatgatgctctaagcagtcctgtggaagacatgccattttttgaagcc
ccaactggttccctcaagcgagctagcagtatgagacggaaaaaactacgcaaacaagaa
tctttgaagaatatgacagaattccagctgaggtttgaagtagctgaggttttaattaaa
ttatgccgtcttactgataataccgagacacctgtgctgcagcttgatgttgtaggatta
ggcacggagcttaaattaaaaacgtttgacatgaccgcaagtgctttccttcgtgaagtg
tgtctgctgtgcccagagtatatggatgataatgacatgccagtttacataattactact
ttggataacgtagaagatgatcttctcactctggagtacataaaggctgatattaatgga
ccagaactgaaaactacctatcagaacgttctacagaaaataaaggtgaacttttcatct
ctagatgttcatttgcatactgaagctctgctgaatgctatgaactatctcaataatctt
ctacccaaacaagaaactaaagttgcagaagaagcagtccatgaaaaaatagaggagaag
aaggatgtccttaaaaaattaacatcaaaaaaatcaaagtatgaagatgttatcgacctc
aatatctgtgcggatttatcctgtttacgtatctttattagagagaaaaaacatagaata
gctgaaattcacattgaaggtctggatagccaagtgatcatgaagaaagcagcaacagaa
gtgactgcaaaattaaagaacatcgttattgtggattctgatgagatggcattgtataaa
aaggctctttacatcacaggaaaggaagtcttcaactttagaatgatatcatatgtgaat
gctacggatggcattgcatatacaaatatggatgttgttgataatcgtgtttatctgact
gttgggtgtattcaagttgtttttgtcaacaagtttgtttcatctattttggcttttata
aataattttcaagccgccaaggaagctcttactgaggcaactgttcaagcagcagagaaa
gcagctacaggtgtaaaagagctagcggagcgtagttcccgtttggccctagatatcaat
attaaagcccctgttgtgataattccacagtcagcaatgtctgcgaatgttctggtggct
gatcttggtctaatcactgtgaagaaccaattctttattgctaaaacaaaaacacggtat
aatctcccacctgttgttgactctatgacggtgaaattgagcgaactaaagttatacaga
tcgtgctatgagccgggttcgttgcagactgaagtacagttgctgcagccactcaatctg
gaagtagctgtcgaacgaaacttagctgctgcatggtataacgaagttcctgatattgaa
atatctggcagactcaagccaatgaatttaattctcagtcaggaagacattaccacaata
ctgaggacactaaatgaaaatataggtggaagctctggttcatcagcgtctttaccagaa
ccaaaagatacgactagccattctagtgatatgcataatacttcacagcactctgcaggt
gtaactgtggtgacatcagctgtggtggaattgcactcacctatgaaaataaaaacaaca
ctaaaactggacttcagattcgactctctgactttggtattgtatagtccaaattcaaaa
caggttacaaatttggatcagagagatgaccttttgaagcttgcagagtttaagttagtt
ttgatgtcagctgctgtcaaaatgttatcagatggttcaatgaatgcttcagtcaagctg
gcaaactgtacattagatgataaaagacagtcaatccagaaggctacaccaaggatggtg
gaaatgaaacatggatatgaaaagaaagttatggtggatataaactataagcaggggaga
gatggcactgttcttgacgtgattgttcaagagatatacctttgtgcaagcatggagttt
ctacttactgttgcagatatattcctaaaggctaatgcagaaagtgctgctgcacagaga
aatcttaaacagtcattacctttaaaggagcaagcaactgtgcagcctgtatcgacaatg
gaaatgaacattgttgttaaaaatccagagattgtgtttgtggccgatttaacaagaagt
gatgctcctgcattggtggttacaacacagtgtgaggtcttcattaaaaatagccctgaa
aggtatagcatgacagctgctgttaaagagatacaaatgaaagcatgcccgtttcttcca
gaaaaaaggaaagggaacattactacggtgttacagccttgtgacctcttctttgaaatg
aaacagtcaggtactaatccacagacagctgatctaacgattaagtctctaacaataaaa
gtttcaccaataatcataaacacagtaattactattacatcagccctttatcaaactgca
gaaacaacagaagaagagattagtcaaattcctccagacttgtggaataagaaagatata
aaaaatttaaaaatgtggtttcttgaagagtcaaatgaaaatgaagatacaaatccaact
gctgaactggttcctacaggagagtcattgaaaatgaatgtagagtctgttcttctaaca
cttgaagctggggttgggcaccgcactgtaccaatgcttttagccaagtcctcatttctt
ggagaagtcaaaaactggagtactctaatcaacttacgttctcgtcttgagctagaggtg
cactattttaatgagatgtttggggtgtgggaacctttgcttgaaccgctagaagttgag
aagactgatttattcaacccatgggttctagaaatcaagatgaagaagaaagctaaaaaa
atgttggttgaatcagatgcagaagaagaagaaaactacaaagtaccagaatataaaaca
gtaataaatgtttcctcaaaagaccagctgaacattacgctatccaaatgcgggctacaa
atgttgagtaacctgggcacggcatttgctgaagcagctagtcaaacttcagacatcttc
aaaaaagaccgagcaccatttgtaataatgaattctttaggacttcccatcactgtcttg
cctagtgattcctttagcgtccttaatgttgaatttggagcgaaaatatttcatttaaga
gatggagagaatttaaatatggaatttctcagaactaataatgagagcgaccagttcaca
gcaatgacaactctgagtagcaagaggttttacattcagatctgtccacataatcattcc
actgtggaaaagattccattgacaaaagtgggtcgatgtatttaccgagtgagacatgag
gaatcgggtgttgaaaggtccattgtctgccaaattgatactgttgaaggaagcaagacg
ataactatacgttctcctattcagataagaaatcatttttcaatcccattaaatattttt
gaggaaggaagatgtttagggactgcttcaccagaaaatgaattcaacataccattgtcc
tcttacagatccatactgagtttgcaaccgctagccaatgaaaatggagtggatggagag
tatgatttgtgtgaaggaattacatttgacgaaattatgaaaaatgttgacagcttatta
caaaggaaatgccagtccgtgaggtcaactaaccactcacttatcatcaatattgttcct
gtaaaagacacgttgacgtcgtctttgtgtgcagaagatcaatgggattttccatatgtt
gttcatttatggccttctgttcttctccgcaatcttcttccttatcaaatcacttattct
atagagggaaatgggaacaaatatggcactttacaagaaggatgttcagcccaaattcat
aatgcagtcttggatcaaacaaaactagatttacagttgcttaactatcttgaccaaaat
tggaaaagtgagtaccatataaaaagcaatctaccggacatcaccttcacaaccttttac
tgcatcacggagttggataagaccgaactggatattgctgtccacgtgacctacactact
gggcagatggttatagcaattcacagtccgtattggatggtaaataaaactggccgaatg
ttgcagtacaaagctgatggtattcaccgcaagcatcctccggattacaaaaagccgctc
cttttttctttccagcccaaaaacttcctccaaaataacaaggtgcaacttatggtaact
gacagtgaactgtccgatcagttttcactagacactgttggaagtcatggttctgtgaaa
tgcaagagtcataagaaggagtatcaagtcggtgtcaccataaacaacagcagttttaat
attactagaattgtaactttcactccattttttatgatctcaaacagaagcaaatacact
ttggaagtagctgaagaaggcaaggaaaagtggattcctattgttttgcaacagtgcatt
cccttttggcctgaagatgatgccaacaaactgcttgttagagtcgaaaattctgatctc
cccccaaagaagataaattttgataagcaagaaaactgtctgctactacatttggacaac
aagcttggaggaattacagtggatgttaacttgactgaacattctacagtgatcaccttc
tctaattaccatgatggtgcagctccgtttctgttgataaaccatactaaagaggaaatt
attgagtatggacaaagttccctcagtgaattggaagactgtcttcagccaaataaggca
gtactgtatacttgggcagacccagcaggatctagaaaattgaaatggaaatgtggaaag
agaactgaggaaattactccaaaagaggacaaaatggaaatactcagcctggattgtaga
aaagtagtctactttgtgtcattttttgaaggtttgcagcgtattgtcctaatcactgaa
gatgagaatgtatttaaattgacatatgaaagtgtaaaagcagaactagcagaacaagaa
attgttctatctttgcaagatgttggaatttcgttggttaataattatacaaagcaagaa
gtgtcctacattggaattacaagttctgatgtggtttgggagacaaaacccaagaagaaa
tcaagatggagaccaatgagtgttaagcagactgataaactagaacaagaattcaaagag
tacagtgagctaactccttcagaaaacaagattattgagttggaatcaaatgttttggtg
tgtttaactcctaatggaatgaacatgaaaattcaacaaccaaatgaaattcctatcaga
aggaattacctgccagctttaaaagtagaatacagttcatctgcacatcagaagtctttc
agaattcaaatttacaggatacagatacaaaaccagattcctggagccatatttcccttt
gtgttctatcctattaaacctccaaagtccatcaccttggattcagcaccaaaaccattt
actgatgtcagtattgtcatgagaactgcaggacattcacaaatatctcatattaagtat
tttaaggtcctgattcaggagatggatctcaggttagatcttggctttctgtatgcactc
gttgaattctttacgcagactgatgtgctgagtgaccaagagctagaacttttcaagaag
gatgttgaatctcttcaagaagaactgatgagtgtgtcatcaatggatacatcacaaatc
agcttgtatgaatactttcatatctctccaattaagttgcacttaagcttttcactcagt
acaggaggagaagatagtaacaaagaagaaagaaagaatgaattgataccacttcagtcc
ttgaatctcctgctgaaaggggctaccctcacagatgtacaagatgttgtctttaagttg
gcattctttgaactcagctaccacttctgtactacacagcagctccaaacagcagtcata
aggcattattcaaaacaggctattaaacagatgtacgttcttattcttggccttgatgtc
ttgggtaatccatttggattcataagaggcttgtcggaaggagtagaagcattcttctat
gaaccttaccagggagccatccagggtcctgaagaatttatagaaggaatggcactagga
cttaaagcactagtaggaggagctgttggtggattagctggtgctgcatcgagaatcact
ggtgctatggcaaaaggagtagctgcgataactatggatgaggattaccagcagaaaagg
agagaagccatgaataaacagcccactggtctgagagagggtatcactcgtggtggaaaa
ggattagtttctggttttgtcagtggcataacaggaattgtaacaaaaccaataagagga
gctcagaaagaaggagcagctggttttttcaaaggtgttggaaaaggcttagtgggagca
gtagctaggcctacaggaggaatcatagacatggcaagcagcacatttcagggtattaaa
aaagttgcagattcatcagaagatgtgataagcctgcgcccacctcgcttctttggtgaa
gatggagttattagaccttacagattaagagatggaaccgggagtcaaatgttacagaaa
atagaaaacggaagatttgcgaaactcagatatattgcacatgctatggtcaacagtaca
gatctgttaatggtgacaaaaagtggtgtgttatttgtgacaaaagggacgtttggacag
ctgacgtgtgaatggcaatacacttacgatgaatttaccaaagaaccgttcattgttgat
ggcagaagattacgcattgaagccaag
DBGET
integrated database retrieval system
