Tauraco erythrolophus (red-crested turaco): 104379288
Help
Entry
104379288 CDS
T08611
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03440
Homologous recombination
teo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104379288 (PALB2)
03460 Fanconi anemia pathway
104379288 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teo03400
]
104379288 (PALB2)
DNA repair and recombination proteins [BR:
teo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104379288 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
104379288 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
104379288
NCBI-ProteinID:
XP_009984822
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
SRDNVSPSADERTASQVQTKTCSDLDTEKKTPVTFQQAHALPRDGVFLQDSSRAEGRQKS
PEKLCCGIARLTPEEKNPQTSRSLMKLRRQMKAPVSEKRESVRDVQLINAGEVVKNQIAS
SERLRSPVFRRSSLSSAEENAQRAPRPALAQREETSFAPPAAALEAVQDTQEGSVPLGVP
ELFPCAPRDSGHVWQPEPSGAAATSGNCEPAQLCSENSDSALLDASGDGGEESSSIIKPT
DSERVCEDQGELRRLLDFMSENEALPGDRNNTVTDESKSREGNGSDANSFSPSPTDLALG
SVEEPVESQHLEIQSGLSHPEKVAAPESALNSCTVVEGLLFPVEYYVRTTRRMSNCQRKV
DLDAVILSQLGRSKKGQRSKCKQKDANSDRPSQERTDNDLESVVTPFPFSGAENDPTNSS
SPQKSLPATSSSSTSCGSVSQNSITSTKRDQRRSQKKQKGRRKSPSKCPVHQVSQERTES
LDLITRGGSSRLLSNEYQSEKENCEANLEKSSSDERRLSAAAAPRSGEAEATGAVQPASA
DPPPGGSLDKCRKTLLEQARNPPQNSDALKPGSGAFASHVGDLEANFTVCQTDKRPVERV
KDRHVQGACRAEQLRATDVPPRRSLRSSARPRASRVSKDGSTRRRSYPTGSEGPASLGSP
ALDLDTCSSLFSFRSLQWLVPVLGIRDFHLPDEEFGLLKLEKLGSFPVNDLEAFVPSVFG
DDVAAEDTQDAQMNPEEKGLKSNLMSPFNSGLPKLPHLESPASKKDLSTHELLFTPTGTV
LAGAPTQPESQISSSVFPVVGVTPAVLPSIGSEVFPRTPSVPPSQVSLHSSRGASAQVVD
DGECKDSAIPLHLDSCGAGSARKEEERGATFPLEADRGPDNEPDEAVALEEHQQSASKQQ
RSCRASPEQKKDAAEELAPVLLDGLREESLQFVSKLKDSSSCAVDVSAMWWEAAGSRALC
VVTACESSVCLWKPLASDRWAKLYTWQLGEIPVIQIVSLPDTCNLVCIALGDLEIGEIRL
LLYSSENDSFKQSLVKTGNIKAVLGLKDRRLVSSSRTVQEQQVEIVSLSETGRSKDGQTL
MPPEETVLAFAEVEGLRDALVGTTAVNSVVVWNLKTGQLLKKMHVGYSYPASICHRAYSD
SGLLFVVLSHPHAKESESCGNPAFRVVAFNPKTGRSTGVMFSSLPPGHTGRYLEGDVRDT
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
gctctagagataacgtgtctcccagtgctgacgaacgcaccgcctcccaggtacagacta
aaacttgctctgatctggacacggagaagaaaacacccgtcacgtttcaacaggctcacg
cactccccagggatggggttttcctgcaggacagctcacgggcagaaggcagacagaaga
gcccggaaaagctgtgctgtggaattgccaggctcacccctgaggagaaaaacccccaaa
cctccagaagcttgatgaagctgaggaggcagatgaaggctccggtgtcggagaaaaggg
aatcagtgcgtgacgtgcagctaatcaatgctggtgaagtggtgaagaatcaaattgcca
gctcggagcgacttcggtcaccagtcttcaggcgaagcagcctctccagcgctgaggaga
acgctcagagagcgcccaggccagcgcttgcacagagagaagaaaccagtttcgctcctc
ccgccgcagcgctggaagctgtacaagacacgcaggaaggcagtgtccctctgggagtgc
ccgagctgttcccgtgtgcgccgagggacagcggccatgtctggcagcctgagccctcgg
gtgctgcggccacgtcgggcaactgtgagcctgcacagctgtgctcggagaacagtgact
ctgctttgcttgatgccagtggtgatggaggagaagaatcttccagtataatcaaaccaa
cggacagtgagagggtgtgtgaagatcagggagagttgcgtaggctcttggatttcatgt
cagagaacgaagcgttgcccggtgacagaaacaacactgtgactgacgagagcaaaagcc
gtgaaggaaatggaagtgacgctaatagcttcagtccctctccaacagatcttgctctgg
gcagtgttgaagagccggtggagagtcaacatctcgaaattcagtcaggactttctcatc
cagaaaaggtggccgctccggagagcgccctgaactcttgcacggtggtggaagggctgc
tcttcccagttgagtactacgtcaggacaactcgacgcatgtccaattgccagaggaaag
tggacctcgatgctgtaatcctgagccagctgggcagaagcaagaagggtcagcgaagta
agtgtaagcagaaagatgcaaattcagatcggccctcccaagaaagaactgacaatgatc
tggagtcagtggtcacgccgttccctttttctggtgcagaaaatgatccaacaaattcaa
gtagtcctcagaaatctcttcctgctacctcttccagcagcacttcatgtggatcggttt
ctcagaacagtatcactagcacaaagcgagatcagaggcgatcacagaagaagcaaaagg
gaagaagaaagtctcccagcaagtgcccagtgcatcaggtgtcacaggaacgtacagaga
gtttggatctcataacaagggggggaagcagtcgtctgctgtcaaatgagtaccagagtg
aaaaggaaaactgtgaggctaatcttgaaaagtcatcttcagatgagaggaggttgtctg
ctgctgcagctcccaggtctggagaggcagaagcgactggtgctgtacagccagcgagtg
ctgatcctcctcctggagggagccttgacaaatgccgtaagactctgttagaacaggctc
ggaatccacctcagaacagtgatgctctgaagccagggagtggagcttttgccagccacg
taggagacctggaagccaacttcactgtgtgtcagactgataaacgtcccgtggagcgtg
tcaaggatcggcacgtgcaaggagcctgccgggctgagcagctccgagcaactgatgtcc
ctccgcgccgctccctgcgttcctctgcaagaccgagagccagtcgagtctcgaaagatg
gcagcacaagaagacgtagttatccaacgggttcagagggtcctgcttctcttggctccc
ctgctctggacctcgacacttgcagctctctcttctccttccgcagtctccagtggctgg
tccccgtgctgggcatcagggacttccacttaccggatgaggagtttggactactaaaac
ttgagaaattaggatctttccctgtgaatgacttggaggcttttgttcctagtgtgtttg
gagatgatgtggctgcagaggacacacaagatgcacaaatgaatccagaagagaaaggtc
tcaaaagtaatttgatgtcacctttcaacagtggattgcccaagctaccccacttagaaa
gcccagcttccaagaaggacctttccacccatgaattgctgtttactcccacggggactg
tcttagctggtgctcccactcagcctgagtctcagatttcctcatctgttttccctgtgg
tgggtgtgaccccagctgttttaccatcgataggcagtgaggtcttccccaggacacctt
ctgtacctccctcgcaagtgagcctgcattcctccagaggagcatctgcccaggtcgtgg
atgatggggaatgcaaagactctgccatcccactgcacttggacagctgtggtgcaggat
ctgctagaaaagaggaggaacgaggtgcgacgtttcctttagaagctgacagaggtcctg
ataatgaacctgatgaggctgtggccttggaggagcatcagcaatcagcaagcaaacagc
agaggtcctgcagagcttctccagaacagaaaaaagatgcagcagaagagctggctccgg
tgctgcttgatggcctgagagaagagagcttgcagtttgtgtcaaagctaaaggattcaa
gttcctgcgctgtggatgtgagtgccatgtggtgggaagcagctggcagcagagcgctgt
gcgtggtgactgcttgtgagagttccgtctgcctctggaaacctctggcgtccgaccgct
gggcaaagctctacacttggcagcttggagagattcctgtaatacagatcgtttctctgc
cggacacctgtaatctcgtgtgtatagcactgggagatttggagattggagaaataaggc
tcttgctttattcttctgagaatgactcattcaagcaatcactggtgaaaactggaaata
taaaagctgttcttgggctgaaggataggaggctggtcagcagcagcaggaccgtgcagg
agcagcaggtggaaatagtatcgctttcagagacaggaaggagcaaggacggacagactt
tgatgccccctgaagaaactgttctagcttttgctgaagtagaaggactgagagacgcct
tggttggcaccactgcagtgaacagcgttgttgtttggaatctgaaaacaggccagctcc
tgaagaagatgcacgttggttattcctatccagcttccatctgccatcgagcgtattctg
actctggccttctgtttgttgttttgagtcacccacatgccaaagagagcgagtcctgtg
gaaaccctgcgttccgcgtggtagcgttcaaccccaaaacaggcaggagcaccggggtga
tgttctcctccctgccacccgggcacactggaaggtacctggagggcgacgtgagggaca
cct
DBGET
integrated database retrieval system
