Tauraco erythrolophus (red-crested turaco): 104379388
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Entry
104379388 CDS
T08611
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
teo03019
]
104379388 (TNRC6C)
03036 Chromosome and associated proteins [BR:
teo03036
]
104379388 (TNRC6C)
Messenger RNA biogenesis [BR:
teo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104379388 (TNRC6C)
Chromosome and associated proteins [BR:
teo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104379388 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA
RRM_1
RRM_occluded
THOC7
Motif
Other DBs
NCBI-GeneID:
104379388
NCBI-ProteinID:
XP_009984949
LinkDB
All DBs
Position
Unknown
AA seq
1721 aa
AA seq
DB search
MATGSAQGNFTGHTKKTNGNNGANGALVQSTSNQSALGAGGANGNGNSARVWGVAAGSSS
GLAHCSASGGDGKMDNMMGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVGA
GNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQESTEPQTSTSQNVSFSVQPQNLN
TDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIPPHLQGLPGANGTSVSQVSGGS
GEGMGSSVWGMSPGNPATGNSNSGFSQGNGDTVNSALSAKQNGSSSAVQKEGNGASAWDS
GPPSGPGVLAWGRGGGNSGVGSMHSGAWGHPNRNTSNGVNGEWGKPPNQHSNSDINGKGS
TGWDSSSVTSPNPAMQQGNEQMNSWAKAAASGTTASEGSNDSGGSQNEGSTGREGAGEGR
RRDKGMIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWG
CAATQSSNSGGKNDGSIMNSTNTSSVSGWVNSPPAAVPTNTGWGDSNNKAPNGPGGWGES
ASSTTVNNAAAAKSGHAWSGTANQEDKSPTWGEPQKPKSQNWGDGQKSNPSWTSGGGDWT
DSTSVPGHLGDGKKNGSGWDSDNRSGSGWNDSTRSGTSGWGNGTNSKANTGTSWGESLKS
GPQQNWANKPQDNNVSNWGGAASVKQTGSGWVGGPVPAKQKENCEATGWEEPSPPSIRRK
MEIDDGTSAWGDPNYNNNKTVNMWDRNNPIIQSSTTTNTTTTSTIINTNMVEPQPSHQSS
AQPNRSPLLGPVSSGWGEMPTVHTKTEASWGEPSSPSAAVDNGTSAWGKPPSSGTGWGDN
PAESAGTYGRTNAPAAAPALCKPASKSMQEGWGSGGDEVNLSTSQWEDEEGDMWNNTASQ
ESSSSCNSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQLTDMGFPREPAEEALKSNNMN
LDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPISKESSMDRPTFLDKDGGLVE
EPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNLNSSRQIPSGNLGMFGNSGAAQ
ARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLSPTQLTSPINNP
QHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTINNMQQQIQQHQRQ
LAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHPQAPGLPDLQTKEQQSSPNTFAPYPLA
GLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTHPNSMDNLSSAASSLDQNSSKHGAIPG
GLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVAVPHSWSRAKTDSDKISNGSSINWPPE
FHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGSSPTSSQNATLP
SSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSGPISHTQASLSHELWKVPRNTT
APTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSAWSTDSSGRTSSWLVLRNLTPQIDGST
LRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEV
NRFLAQGQALPPTSSWQSNTGTNQPRLGSSSSSHALVRSDAGHWNTPCLGGKGSSDLLWG
GVPQYSSSLWGPPSADDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atggctacagggagtgcccaaggcaacttcactggacatacaaagaaaactaatggcaat
aatggcgccaacggagcactcgtccaaagcacttctaaccagagtgcccttggagctggt
ggagcgaacggtaacggcaactcggccagagtgtggggtgtggctgcgggctccagctct
ggcctagctcactgctctgccagtggtggagatggaaagatggacaacatgatgggagac
ggtagaagtcagaactgctggggtgcttccaactcgaatgctggcattaatcttaacctt
aaccctaatgccaatccagctgcctggcctgtacttggacatgaaggaactgtgggagca
ggcaacccttccagtatttgcagtccagtcagtgccataggtcagaacatgggcaaccag
aatgggaacccaacaggcaccttaggtgcttggggaaacttgctgccgcaagagagcaca
gaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaaccttaac
actgatggaccaaataacactaaccccatgaactcttcaccaaaccctatcaatgcaatg
cagacaaatggactgccgaactgggggatggctgttggtatgggggccatcatcccgccc
cacctgcaaggccttcctggtgctaacggaacatcggtttctcaagtcagcgggggcagt
ggtgaaggaatgggcagttcagtgtgggggatgtccccaggtaatcctgccacaggaaac
agcaattctgggttcagtcaggggaatggagacactgtgaactcagcattaagtgctaaa
caaaatggatccagcagcgctgtgcaaaaggaaggaaatggagcgagcgcgtgggattcg
gggcctccttctggtcctggggtactagcgtggggcaggggcggtggcaacagcggtgtt
ggcagtatgcattctggagcttggggccaccccaaccggaacaccagtaatggtgtgaac
ggtgaatggggcaagcccccaaaccagcattccaatagtgacatcaatgggaaaggatca
acagggtgggatagctctagtgttaccagtccgaatcctgccatgcagcagggcaacgaa
caaatgaactcttgggccaaagctgcagcatcgggcaccacagctagcgaaggaagtaac
gacagtggtggcagtcaaaacgaaggcagtactgggagggagggggctggagagggcagg
aggagagacaaagggatgatagaccaagggcaagttcagttgccaagaaatgaccttgac
cccagggtcctgtccaatacagggtggggacagacccctgtaaagcaaaacactgcctgg
gaatttgaagagtccccaaggtctgaacgaaagaatgacaatggaacagaggcctggggt
tgtgcagctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaacagt
acaaatacctcttcagtatctgggtgggtcaactctccaccggcagctgttccaacaaat
acaggttggggagacagtaacaacaaagcaccaaacggcccagggggatggggagagtca
gcaagctctactactgttaataatgctgctgctgccaaaagcggccacgcttggagtggg
accgcaaatcaggaggacaaatcacctacctggggtgaacctcagaaacccaagtctcaa
aactggggagatggacagaaatcaaatccaagctggacttcaggaggtggagattggaca
gattcaacatctgttcctggacacttgggtgatgggaagaagaatggatctggatgggat
tctgacaatagatcggggtctggttggaatgattccacaaggtctgggaccagtgggtgg
ggaaatggcacaaacagcaaggctaacacaggtacaagttggggggagtctttgaagtca
ggcccccaacaaaattgggctaataaaccccaggacaacaatgtgagtaactggggagga
gctgcttctgtaaaacagacggggtcagggtgggttggtgggccggtgccagccaaacaa
aaagagaactgtgaggcaactggctgggaagagccatctccaccgtccattcgccgcaag
atggaaatcgatgatggtacctcagcttggggcgacccaaattacaacaacaacaagact
gtaaacatgtgggatagaaataatcctataattcagagcagtaccacaaccaacaccacc
accactagcaccattatcaacacaaatatggttgaacctcagccgtcgcaccagtcaagt
gcccagccgaaccggtccccgctgcttggtccagtctcatcaggctggggagagatgcct
actgtccacacaaagactgaagcttcttggggagagccgtcgtccccttctgctgcagtt
gataatggcacttcagcatgggggaagccccccagcagtggtacagggtggggagataat
cctgccgagtcggcagggacatatggaagaacaaatgctccagctgctgccccagcactg
tgcaaaccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgaagtgaat
ctcagtactagtcagtgggaagatgaagaaggagatatgtggaataatactgcttcacaa
gagagcagctcctcctgtaattcctgggggaacgccccgaagaaaggacttcaaaagggc
atgaagacatctagcaagcaagatgaggcctggatcatgaaccgtctgattaaacagctc
acagacatgggcttccctagagagccagcagaagaggccttgaagagcaacaatatgaat
ctcgatcaggccatgagtgctctgctggaaaagaaggtggaaatggacaagcgtggaatg
ggagtgaccgactataatggaatggtcaccaaaccccttggctgccgcccaccaccaatc
tccaaagagtcttccatggaccgccccaccttccttgacaaggatggcggcctagtggaa
gagcccactacttcaccatttttgccttcaccaagcctgaagctccccctttcaaacagt
gcactccctaatcagaccctgggcgggattgcctcagggctgggcatgcaaaacttgaat
tcttctagacagataccgagtggcaatctgggtatgtttggcaatagcggagcagcacaa
gccaggaccatgcaacagccgcagcaaccgccagtgcaacctcttaattcatcccagcct
agtcttcgtgctcaagtgcctcagtttctatcccctcaggttcaagcacagcttttgcag
tttgcagcaaaaaacattggtctcagccctacacagttaacctcgccaattaataatcct
cagcatatgacgatgttgaaccagctctatcagctgcagctggcgtaccaacgtttacaa
atccagcagcagatgttacaggctcagcgtaacgtttccggacccatgagacaacaggag
cagcaagttgcacgtacaatcaataacatgcagcagcagatccagcagcaccagcgccag
ctggcccaggccctgcttatgaagcagcagcctccccctccacatctatctttgcacccc
tctgcaggcaaatcagccatggatagcttttcaccccatccccaggctcccggcctacct
gacctgcagaccaaagagcaacagtcttcaccgaacacctttgctccttaccctcttgct
ggactgaacccgaacatgaatgtaaataacatggacattactggtggtttgtcagtgaag
gacacttctcagtcccaatctcgccttcctcagtggacacaccccaactcaatggataat
ctgtctagtgctgcttcttcgcttgaccagaactccagcaagcacggtgctatacctgga
ggtttaagtattggtcctccgggaaagtcctccattgatgactcttacggccggtatgat
ctgattcagaacagtgaatcgcccgccagtccacccgtggctgttcctcacagctggtca
cgtgccaaaaccgatagtgataaaatttccaatggctccagcataaactggcctccagag
tttcatccaggagttccatggaaaggactgcagaatattgatcctgaaaatgaccccgat
gttactcctggaagtgttccaactgggcccaccataaacaccacgatacaggatgttaat
cgctatcttctcaaaagtggagggtcatccccaacatcatctcagaatgccacgctgcct
tcatcgagtgcctggccgcttagtgcctccggctacagtagctctttcagcagcattgca
tccgcacctagcattgcaggtaaattgtcagacatcaagtctacgtggtcctctggccca
atctctcacacacaagcctctctatcccatgaactatggaaggtacccagaaacactact
gctcctacgagaccacctccaggcttaacaaacaccaagccatcatctacatggggtgcc
agtcccctgggttggaccagctcttactcctctggttctgcatggagtactgacagctca
gggagaacaagcagctggctggttcttcgaaacctcacaccccagattgatggctccaca
ctgcggacactgtgtttgcaacatggccctctaataacattccacttgaacctgacacaa
gggaatgctgtggtccgatacagttccaaggaagaagcagccaaggcccagaagtctctg
catatgtgtgtcctgggaaacactaccatcctggccgagttcgctggtgaagaagaagtc
aaccgcttcttggcccagggccaggcgctgccgcccacctccagctggcagtccaacact
ggaaccaaccagcctcgcctgggctcctccagcagctctcacgccttggtgcgcagcgac
gccgggcactggaacacgccctgcctggggggcaaggggagcagcgacctgctgtggggc
ggggtgcctcagtactccagcagcctttgggggcccccgagcgccgacgacggcagagtc
atcggcagccccacacctttgaatactcttcttccgggtgatcttctcagtggggagtcc
atctag
DBGET
integrated database retrieval system
